| Id Trinity | FTRINITY_DN52467_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_87878 |
| Sequence | CTTCTCACATTGATTTTGCTCATCACAAGGTTCAAATAATACTCTCCAACTGACTTCTAGATGCAGGATATTAATTTTCTATCAGTTTGATAGTTGCTAG TATTTTATTTTGGCCCTGTTGTAAGTGAAATTTGTTGAATATAATAATGTTATGCTGATGCAATAAAAAGATTGTTGTTAGGGAGAATCTGTTGGTTAGT TCCATTTATTATATATCTTACTGAAACTGCCGCATGTTGTCGAAAACTTTGAAGTCAGAGTAATTGAGAAGCCCTTCTCATGGCCCATGGGTACAGGATA TGGTAAACCTTGAATGTCAGTGTTATTTTTCTAACATTCATTTTATTCTGTTGTGATTTTTTGTAAGAAGTTAGTCAGTGTATTAGATCTTATACTTTTA CCATATATATGTTTCTAATATACAATTCTTGCAACCTAGCATTGTGCTTGTTTACATCATGCATTATGGTCCTGTAGTTTAGTGTTCCTTCATCATTTTG CTAATGGAATATTAGCAGTTTATTTAGCTATTATGTATTATTAATTTTGACACTAACTAGAGTACTAGACATATGCTGTTGCTAAAGTTGGAATTATTTG GTACTGTTAGGTTGTTCAATAATTCCCACCCACTAACATTAAAATGATCCATACTCTTCAGGTTACAGGAAGGAGAGACAGAGCGAAGCCTCTGACATTC AAGATGGATTCTCGTGGTCCATGGGGCTTTGCAGGAGCTAATGATGGGAACCCAAAGATCAGTGCTAAATTTATTGCACCATGTTATTCTATGAACAAGT AAGCCAATGGCTTTTGGCCTTTTGCTTTGGAAGTAAATGTCACATGTATCTAGGTTTTGTTTTATATGAAAATTATTCAATGTCCGCATTTAATAATGAA AGAACTTTGTATGAAATTTGTACATGTTTTTGTCTGTGTGTTTTTTCATCTTTAAGGGCAAAGTGTTGGGTATCATGCATTACATCAGAACTCATATGTA TCTTGTGTCGCATACATTCGAAATGAAAATGTAATAGTAGAGCATCAAAGCTTCCTGCATGTGGATGAATTCAGTATCACACAGTCAATTTCGATAGTTC ACAGGAATCTTATATTTTTTTACTTCTGTTAATTTCATTCTTTTTCACCCCTAAAGGACCACTGGGAAAGTAATTTTGGAAATGTGTAACTGTCTTTCTA ATCAAACCGTAATATACCATCCAGTACTTAAGATGAGACATGTCTTGTTAAGTTATCTTCAGTTTCACTGTGTGACAGTGTGAGGTGCTTGAAAAGCATT CTCGGACCAGTTGTGTGATTTTATGGATAATGCTTGAATCATCAATGTCAGTTTCAGTAGGTATATTGATACTAATATCTAGTTAATTCTGTGGGTGGCA TATATGACAACCACATTCAAGATGCATGTCAAATAACTACCACTTTAGGTTTGGATGCTATAGCTTTTCTTTTTCATTTGTTGCTACTGCAGCCAAATAA ATTTGGCGTAATTATTATTGCAGAATCGAGATTGATACCAAGCTCCCAATAGTTGGAGACCAGAAATGGGTAATATGGATATGTTCATTCAATATCCCCA TGGCACCTGGTAAGACGCGATCCATTGTCTGCAGTGCTCGAAACTTCTTCCAGTTCACAGTGCCAGGGCCTGCCTGGTGGCAAGTAAGATTCTATGTTCA ATGTTACATAAAATGTGGCTTTCTATTATGGTGATTGAGATTCATCAACTTGTTGTGGCAAAGTATAAATAGACACTGCCATTTAGCTTTTTCTTAATTT GAATATAGGGGGAAGGATGTTAAAACCTTGTCTTCTAGTGGGGGGTTTAGATCCTCTCTCATGTCATTCCTTTTACAAAGTTTGCTGCATTTGTTAACTA TAAGATACAAAGGGTATCGCCGAATCTGAAATTTGGTTTTCTTTGTAGTTCTCTTCAATTTAATAATCAGGACTCTCATTTAGCTATGTCTATTCAATTG CAATTAACTTAGCTTACCCACAGTGTTACCTTATCATTTCTCTTTTATTTTATGAATACTTATGTGCAACTTAGAGCTCTTACTTTCACCTTACCCATAT CTTCAGGTGGTTCCGAGATGGTATGAACATTGGACTTCAAACAAGGTATATGATGGAGATATGATTGTTCTTCAAGGTCAAGAGAAAATATTTCTAACAG CAACTAAAGAGGGTGGTGACATTAATAAGCAGTACACAAACATCACCTTCACACCAACACAAGCCGATCGCTTTGTCCTCGCATTTCGTAATTGGCTGAG ACGACATGGCAACAGCCAACCAGAATGGTTCGGGACAGTCGATCAGCAGCAGTTGCCATCAACAGTTTTATCGAAACGTCAGGTATGGCTGACAATTTCA TGTCTCTTAATCAGTTAAAACCCTCTCACATTTTCCACCAAACCAAGAATGAAAACCAACTTATTATTGTTGTTTCTGTAGATGATGGATAGATTTGAAC AGCACACACTAAAGTGTTCATCATGTAAAAGAGCTTATGAAGCATTCCAAACATGGCAAAAAATCCTAATTGGTGCAACAGTTTTGTTTTGTGCAACATC AGGGATCCCATCAGATATTCAGTTGCGTGTAATCTTGGCTGCACTTGCACTTGCTACTGCAGGCTTAGCTTTTGCCCTTAACCAACTTCAAAACAATTTT GTATTCATTGATTATGTTCATGCTGATATTGATTAAACACACTTGTATTATATGTGTATATATGATCAAAGAGTTTCTGTGTATTCTACAATAGACTACT AGTTTTAACCAATTACCTTAAATAAATCATATTTCCCTCATGCTTGGTTCTAATTTAAGAGATTAAATACATTGAATCATTGTCTGATTAGTTCAATATG GTATTCTATAAAAAAGTTTAACTCATTTAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_25752; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_87878
| Blastp | Pheophorbide a oxygenase, chloroplastic from Arabidopsis with 78.35% of identity |
|---|---|
| Blastx | Pheophorbide a oxygenase, chloroplastic from Arabidopsis with 57.75% of identity |
| Eggnog | rieske 2fe-2S domain-containing protein(COG4638) |
| Kegg | Link to kegg annotations (AT3G44880) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413798.1) |
| Pfam | Pheophorbide a oxygenase (PF08417.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |