Ll_transcript_87882

• Id Trinity: FTRINITY_DN52467_c2_g1_i1
• Name Transcript: Ll_transcript_87882
• Sequence: GGAATGATGTATCCTCCTACCCACAACAAATTCGTTAATAAATAAATTATCACTTTGTGACATGTCACTTTCTTGTGGATAGGAGGATTTGTATGATGAT TTAGTAGGAAAATATATCATTTTTTCCACAGATAAAAAAAGAGAGTAAAATGAAGCCATGATAAGTGTATTGGCCTAATTTGATTGCATCAAGAGGGAGA GTGAGTGTGAGTGTTGTTGTTGTCGTCAACACAACACAACACTGAGAATGGAAAACGCCGACGTTTTCTTAGGCTTACACGATTTCCTCGATCGCATGCG TCAACCCTCCGCTTCCGATTTCGTTAAATCTATCAAAAGTTTTATAGTTTCATTTTCAAATAATGTTCCTGATCCAGAGAGGGATAGTACATCAGTACAA GAGTTTTTTTCCAATATGGAGGCAGCTTTTAGGGCTCATCCTCTTTGGGCTGGTTGCTCTGAAGACGAGCTCGAAAGTGCCGGTGAAGGTCTTGAGAAGT ATGTCATGACAAAGTTATTTTCTCGCGTGTTTGCTTCAGTTCCAGATGATGTAAAACTCGATGAACAACTTTCTGAGAAGATGGCCTTGTTTCAACAGTT TATTCGACCAGAAAATTTGGATATCACGCCAGCTTTTCAGAATGAAACATCATGGTTGCTTGCACAGAAAGAACTACAGAAAATCAACATGTACAAGGCA CCCAGAGACAAACTTGTTTGTATCTTGAATTGTTGCAAGGTTATTGGTAATTTGCTACTTAATGCTTCTGTCACATCCAATGAAAATCCTCCAGGAGCTG ATGAATTTCTTCCTGTGCTAATTTATGTTACCTTAAAGGCAAACCCTCCACAACTGCACTCAAATCTGCTGTACATACAAAGGTTTAGACACCAATCTCG GTTGGTCGGGGAAGCAGCATATTATTTTACAAACATGCTCTCTGCCGAGTCCTTCATCTCAAACATTGATGCAAAAGCCATTTCAATGGATGAAACTGAG TTTGAGAGAAACATGGAGTTCGCTCGTGCCCTTCTTTCGGGGCTTTCTATTGATACACAAGATCCAAGTTCACCTTATCCAAATCATGGACACCATCCAA GGTCAGAACCTACTAAGCACAGAAATAAAGCTTTGAATGATAATAAGGACCCTGCATCACAAACTGCGTCATCGGCTGCAAAATCTGAAATTAAGAAAGT GACTTCCGAGGATGAGTTTTTGATCACAAAAGTTCCATCCCTCTCGGATTTGGAGAATAAAGGAGCAAACATGCTTTTAAAGGAGGACAAGGTGAATGAT GTTTTCAGGGAATATCCATATTTGTTTTCTAGTGTAGGAGATCTTACAGTATCTGATGTTGAAGACCTGCTAAATAATTACAAACAACTTGTTTTCAAGT ATGAATGTCTTTCCAAAGGGTTAGGTGTCTCTCCTACATCTCATCCTCCATCTACTCCGAAAAACAAAGCCCAAGACCATGCTGAAACCACAGTAGAATC TTCAGATGATGGACCTATAGGTGCCAATGATAAATTAGATGAATCTACTGACACAACAGAAGATAGTTCAGATAAAGTTTCACTTCTTGGGGAGAAAAAA ATTGAATCTGGTCTGCCACATGATGATGCAGTTGCGCCTGAGGGTGATACCGAAACAGAAACCTCTAGTTAATTGTAACTAGCTAAATCATTTATTTTTC TTCATTATGCAGTCCTCATTTTTTGCTCTTTCTTGTTTAATTTACATTTTCGGTTGCGTGGTTGCTGCTCTAGCCCCTAACTTTCTTATGTGAAAGGATG GAAATGCCATGACTGTACTGTTATGCCCTGTGTAACATGTTATTGAATAGATTTTAGAACTGCAGTGAAATTTTTTT
• Tissue: flowers
• Gene name: LI_gene_25755;
• Additional information: details;

Expression of Ll_transcript_87882

FPKM

• FPAB: 9.7
• FPNAB: 13.7
• LF1: 12.9
• LF2: 9.2
• LF3: 9.6
• LF4: 10.6
• UF1: 12.2
• UF2: 9.2
• UF3: 8
• UF4: 8.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_87882

• Blastp: Vacuolar protein sorting-associated protein 9A from Arabidopsis with 64.27% of identity
• Blastx: Vacuolar protein sorting-associated protein 9A from Arabidopsis with 66.43% of identity
• Eggnog: guanine nucleotide exchange factor(ENOG410YGAZ)
• Kegg: Link to kegg annotations (AT3G19770)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415562.1)
• Pfam: Vacuolar sorting protein 9 (VPS9) domain (PF02204.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;