Ll_transcript_87888

• Id Trinity: FTRINITY_DN52467_c2_g1_i4
• Name Transcript: Ll_transcript_87888
• Sequence: GGAATGATGTATCCTCCTACCCACAACAAATTCGTTAATAAATAAATTATCACTTTGTGACATGTCACTTTCTTGTGGATAGGAGGATTTGTATGATGAT TTAGTAGGAAAATATATCATTTTTTCCACAGATAAAAAAAGAGAGTAAAATGAAGCCATGATAAGTGTATTGGCCTAATTTGATTGCATCAAGAGGGAGA GTGAGTGTGAGTGTTGTTGTTGTCGTCAACACAACACAACACTGAGAATGGAAAACGCCGACGTTTTCTTAGGCTTACACGATTTCCTCGATCGCATGCG TCAACCCTCCGCTTCCGATTTCGTTAAATCTATCAAAAGTTTTATAGTTTCATTTTCAAATAATGTTCCTGATCCAGAGAGGGATAGTACATCAGTACAA GAGTTTTTTTCCAATATGGAGGCAGCTTTTAGGGCTCATCCTCTTTGGGCTGGTTGCTCTGAAGACGAGCTCGAAAGTGCCGGTGAAGGTCTTGAGAAGT ATGTCATGACAAAGTTATTTTCTCGCGTGTTTGCTTCAGTTCCAGATGATGTAAAACTCGATGAACAACTTTCTGAGAAGATGGCCTTGTTTCAACAGTT TATTCGACCAGAAAATTTGGATATCACGCCAGCTTTTCAGAATGAAACATCATGGTTGGTGGGTATATAACTAAACATTCAAAACTATTTTTATTTGGGT CTATATATACAGTTAGGTCAGCTAAAGCCATGCCCTCATGTTTTATCACTTAAAAAGGGACAACAAAATAATTATGTTCAATGAGTTCTTGGATTGTCAA CCAACAATGATACAATATCAACATTAGGGTAATTCTATATACACCCATAAAACCATTATTCACACCCAAACGGATAGCCTATCTGCCAGGCTATTTACAC AGACAGGTAGCCATCTGAAATTCTGAATGGGTGTGAGCAATGGTTTGTTGGGTGTGTATAGAATTGCCCTCAATATTGAAAGCAACCTAACTTTTCTCAT GTCTCTTGTAGCCTGGTTTTTACGGCAACTGTGAAGTTTTTGGTGTTCACCATAAACTCATATCTGAACTTGTTGAGAATTGTATGATTAAATTCCAAGT TGGAACCCCACATTCATGGAACATGAGCACCTTAGACTAAGTAGTCTAAGCTCATATCCTAGGGGTCCCTATTCTTTCAGTTTAATTTTAGTACATCAGA AGTATAATTTACGATCTATCCACATTTCACTTACTTTTGGTCTTCATTTCTCAATGCCTTTAGATTGAGTGACTCTTGGCTGTCACAGTTGGATTTCAAT GATTTTAGATATGGTTATTGGGTTTGTTCTAAAGGTTGGTGGATAATATTCTCCATGGCCAAGATTTTCCTAAGAATCAACTTTCTGTTTGATGTATTCT TGAGCTCTCACTAGTCACTATATTAGTTTGTAAGTAATGAGTTTGTCAATTGCAGGCAGAAACCTTGGAAGAATTCTTCCTAATTTCTGCTTCCTTTAAA TCTCATACTTTCTGTCTTATTCTTATGGTGGCAGCTTGCACAGAAAGAACTACAGAAAATCAACATGTACAAGGCACCCAGAGACAAACTTGTTTGTATC TTGAATTGTTGCAAGGTTATTGGTAATTTGCTACTTAATGCTTCTGTCACATCCAATGAAAATCCTCCAGGAGCTGATGAATTTCTTCCTGTGCTAATTT ATGTTACCTTAAAGGTAATCTCATCATTCAAACACAAATAGATGCATGCATTTTTTTGGCATAAGTAATTTGGTTTTACAGCACATTGTTATTACTTGTA CTTCATAAAAAAATTATGGGTATAACTTACCTTTAGTTCTATCTCACATTGCTTTGTTTTTTTCACTGCGTGAATTTTGTTTATTTTAATAAAGCATGTA ATTCTGTGAAGTTATGTTGTAAAGTCACTTGTGACTTATTTTACAAGACAATATTTAATATGGGTGTTGAAATATCATGTTGCATGTGCTGGTCAATTCA TCTCAGTGTTATCATATTTTGCATAGGTATGCATATCCTCCTTTCTGAGTGTTGGCTGCATCATTTTTTGCTTTGAAGAACTTAGTGCTTTGAACTGCAG CTGCTCATAGTGCAGAGCTATATGACCTTATCTTTCAAAATGTTTTTTTATATGAAAAGTTTTCACTTGTATTTTTTGCTCAAAACTATGGAGTGAATAA TGACTAAAATAGACAATTGATACAGACTGCTGTCAGATTTCAAATAATATTGTATATTGTGTTCCTATATTGGCAAAACAGGTACATTTTTTTTACTAAC GATACTATGCAGGCAAACCCTCCACAACTGCACTCAAATCTGCTGTACATACAAAGGTTTAGACACCAATCTCGGTTGGTCGGGGAAGCAGCATATTATT TTACAAACATGCTCTCTGCCGAGTCCTTCATCTCAAACATTGATGCAAAAGCCATTTCAATGGATGAAACTGAGTTTGAGAGAAACATGGAGTTCGCTCG TGCCCTTCTTTCGGGGCTTTCTATTGATACACAAGATCCAAGTTCACCTTATCCAAATCATGGACACCATCCAAGGTCAGAACCTACTAAGCACAGAAAT AAAGCTTTGAATGATAATAAGGACCCTGCATCACAAACTGCGTCATCGGCTGCAAAATCTGAAATTAAGAAAGTGACTTCCGAGGATGAGTTTTTGATCA CAAAAGTTCCATCCCTCTCGGATTTGGAGAATAAAGGAGCAAACATGCTTTTAAAGGAGGACAAGGTGAATGATGTTTTCAGGGAATATCCATATTTGTT TTCTAGTGTAGGAGATCTTACAGTATCTGATGTTGAAGACCTGCTAAATAATTACAAACAACTTGTTTTCAAGTATGAATGTCTTTCCAAAGGGTTAGGT GTCTCTCCTACATCTCATCCTCCATCTACTCCGAAAAACAAAGCCCAAGACCATGCTGAAACCACAGTAGAATCTTCAGATGATGGACCTATAGGTGCCA ATGATAAATTAGATGAATCTACTGACACAACAGAAGATAGTTCAGATAAAGTTTCACTTCTTGGGGAGAAAAAAATTGAATCTGGTCTGCCACATGATGA TGCAGTTGCGCCTGAGGGTGATACCGAAACAGAAACCTCTAGTTAATTGTAACTAGCTAAATCATTTATTTTTCTTCATTATGCAGTCCTCATTTTTTGC TCTTTCTTGTTTAATTTACATTTTCGGTTGCGTGGTTGCTGCTCTAGCCCCTAACTTTCTTATGTGAAAGGATGGAAATGCCATGACTGTACTGTTATGC CCTGTGTAACATGTTATTGAATAGATTTTAGAACTGCAGTGAAATTTTTTTCAAGAACAATTAGAAAATTTGCAATGCTTTTTGTAGCGAATAAAAAAGA ATGTGAAGATGCAAATGTACTTTAGTTTGATTAACACTATGCGGTGAATATTGGTTGATGGAGATATTAGCTTGTTTTTATTAAAAAAAA
• Tissue: flowers
• Gene name: LI_gene_25755;
• Additional information: details;

Expression of Ll_transcript_87888

FPKM

• FPAB: 0.2
• FPNAB: 0.4
• LF1: 0.6
• LF2: 0.1
• LF3: 0.3
• LF4: 0.1
• UF1: 0.2
• UF2: 0.4
• UF3: 0
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_87888

• Blastp: Vacuolar protein sorting-associated protein 9A from Arabidopsis with 50% of identity
• Blastx: Vacuolar protein sorting-associated protein 9A from Arabidopsis with 76.98% of identity
• Eggnog: guanine nucleotide exchange factor(ENOG410YGAZ)
• Kegg: Link to kegg annotations (AT3G19770)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415562.1)
• Pfam: Vacuolar sorting protein 9 (VPS9) domain (PF02204.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;