| Id Trinity | FTRINITY_DN52467_c2_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_87890 |
| Sequence | AGTCAACATTTGATATTGATTTAAACTATATTTATATTGGAATTTCGATCTCTTTTTGTATATCGGAAATCGGAATGATCAAATTAGTTACTTATCCGAT GATCAAATGTTTTGCTGCTCATACATTTCACGAATGTTGGGCTACCTGCTAATCTAATATGGTATTGAAGCCCATCTCGATGTTTAGAAGTTCACAGATG TCTAGTCCCGACTCACATCTGGATGCTCTATTTATACACTCTACTAATTAAATGCAGGATCTATCAAGTTGTAGACATAGAATTGGGATAATGAATGTGC TCTGATACAACATATTTTTCACATAAAAGATAATGCTTGGAAAATAATGTTCATTACTAACAATATTGTGCTAGCACAATCAAGCATAAACTAATCAATT TCTCACTCACAGTTGTTTTTCATCCCCCTTAGCTTTCTTAATCATAAGTTCGTAACTCCTTGGTTTTCCTCTGGGTTGTCTGAAATATCTATGTTTATTC TATTCTTTAATCCTGTGTGGGTGAGTATTTCTCCCCCTCTATTTTTCTCCTCTCTTTATACCATACCTAACATAGTGTTAGTAACTGGACTGGTCAAAGA AAACATCTTATGATTTACTGCCTAAACTTTATTATGATAGAAATCAATATGAGTGAAGTTATCTTAATTTCTGGACAACTTTAATTTCACTTAAAATCAT ATGATGAGATAGAAATTTATGCAAAAACTTGTTAGCCGTTGTATAAAAAGTTTTTATCCTCTAGTTACATAATAGGTAAATAATTCTTGAACTGGCCTGG ATGTTAACTTAACAATGACTTAGGTTCAATGTTGTATCATATGTATATTCTAGTTGATGGGTGTCCTTGGATAAGAAACAAGCAAGTTCAAGGCACATGT GTGATTGAACCTTGGTGGTAGTTTATCTAGTCATTCTCTGCCAACTTAAACACCCATCCCAGACATTTTTTTTTGAGAAAGCTCATTCTTTTTTGTTTTA TTGATCTGTGGCAATCATACAGGTAGAGAAATAAACGTTCGCCATGCATATATGTTCTCTGTTACTTATAGAAAACAACGTTCTAAGTTCTTCCCTCGTG AAATTTGCTGATACTACGATGCTTCCTATATTGGTTGACTTCCTTACCTTACATTTTGTTTTCGGTCATATACAGGGTCTTGAGAAGTATGTCATGACAA AGTTATTTTCTCGCGTGTTTGCTTCAGTTCCAGATGATGTAAAACTCGATGAACAACTTTCTGAGAAGATGGCCTTGTTTCAACAGTTTATTCGACCAGA AAATTTGGATATCACGCCAGCTTTTCAGAATGAAACATCATGGTTGGTGGGTATATAACTAAACATTCAAAACTATTTTTATTTGGGTCTATATATACAG TTAGGTCAGCTAAAGCCATGCCCTCATGTTTTATCACTTAAAAAGGGACAACAAAATAATTATGTTCAATGAGTTCTTGGATTGTCAACCAACAATGATA CAATATCAACATTAGGGTAATTCTATATACACCCATAAAACCATTATTCACACCCAAACGGATAGCCTATCTGCCAGGCTATTTACACAGACAGGTAGCC ATCTGAAATTCTGAATGGGTGTGAGCAATGGTTTGTTGGGTGTGTATAGAATTGCCCTCAATATTGAAAGCAACCTAACTTTTCTCATGTCTCTTGTAGC CTGGTTTTTACGGCAACTGTGAAGTTTTTGGTGTTCACCATAAACTCATATCTGAACTTGTTGAGAATTGTATGATTAAATTCCAAGTTGGAACCCCACA TTCATGGAACATGAGCACCTTAGACTAAGTAGTCTAAGCTCATATCCTAGGGGTCCCTATTCTTTCAGTTTAATTTTAGTACATCAGAAGTATAATTTAC GATCTATCCACATTTCACTTACTTTTGGTCTTCATTTCTCAATGCCTTTAGATTGAGTGACTCTTGGCTGTCACAGTTGGATTTCAATGATTTTAGATAT GGTTATTGGGTTTGTTCTAAAGGTTGGTGGATAATATTCTCCATGGCCAAGATTTTCCTAAGAATCAACTTTCTGTTTGATGTATTCTTGAGCTCTCACT AGTCACTATATTAGTTTGTAAGTAATGAGTTTGTCAATTGCAGGCAGAAACCTTGGAAGAATTCTTCCTAATTTCTGCTTCCTTTAAATCTCATACTTTC TGTCTTATTCTTATGGTGGCAGCTTGCACAGAAAGAACTACAGAAAATCAACATGTACAAGGCACCCAGAGACAAACTTGTTTGTATCTTGAATTGTTGC AAGGTTATTGGTAATTTGCTACTTAATGCTTCTGTCACATCCAATGAAAATCCTCCAGGAGCTGATGAATTTCTTCCTGTGCTAATTTATGTTACCTTAA AGGCAAACCCTCCACAACTGCACTCAAATCTGCTGTACATACAAAGGTTTAGACACCAATCTCGGTTGGTCGGGGAAGCAGCATATTATTTTACAAACAT GCTCTCTGCCGAGTCCTTCATCTCAAACATTGATGCAAAAGCCATTTCAATGGATGAAACTGAGTTTGAGAGAAACATGGAGTTCGCTCGTGCCCTTCTT TCGGGGCTTTCTATTGATACACAAGATCCAAGTTCACCTTATCCAAATCATGGACACCATCCAAGGTCAGAACCTACTAAGCACAGAAATAAAGCTTTGA ATGATAATAAGGACCCTGCATCACAAACTGCGTCATCGGCTGCAAAATCTGAAATTAAGAAAGTGACTTCCGAGGATGAGTTTTTGATCACAAAAGTTCC ATCCCTCTCGGATTTGGAGAATAAAGGAGCAAACATGCTTTTAAAGGAGGACAAGGTGAATGATGTTTTCAGGGAATATCCATATTTGTTTTCTAGTGTA GGAGATCTTACAGTATCTGATGTTGAAGACCTGCTAAATAATTACAAACAACTTGTTTTCAAGTATGAATGTCTTTCCAAAGGGTTAGGTGTCTCTCCTA CATCTCATCCTCCATCTACTCCGAAAAACAAAGCCCAAGACCATGCTGAAACCACAGTAGAATCTTCAGATGATGGACCTATAGGTGCCAATGATAAATT AGATGAATCTACTGACACAACAGAAGATAGTTCAGATAAAGTTTCACTTCTTGGGGAGAAAAAAATTGAATCTGGTCTGCCACATGATGATGCAGTTGCG CCTGAGGGTGATACCGAAACAGAAACCTCTAGTTAATTGTAACTAGCTAAATCATTTATTTTTCTTCATTATGCAGTCCTCATTTTTTGCTCTTTCTTGT TTAATTTACATTTTCGGTTGCGTGGTTGCTGCTCTAGCCCCTAACTTTCTTATGTGAAAGGATGGAAATGCCATGACTGTACTGTTATGCCCTGTGTAAC ATGTTATTGAATAGATTTTAGAACTGCAGTGAAATTTTTTTCAAGAACAATTAGAAAATTTGCAATGCTTTTTGTAGCGAATAAAAAAGAATGTGAAGAT GCAAATGTACTTTAGTTTGATTAACACTATGCGGTGAATATTGGTTGATGGAGATATTAGCTTGTTTTTATTAAAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_25755; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_87890
| Blastp | Vacuolar protein sorting-associated protein 9A from Arabidopsis with 56.71% of identity |
|---|---|
| Blastx | Vacuolar protein sorting-associated protein 9A from Arabidopsis with 58.9% of identity |
| Eggnog | guanine nucleotide exchange factor(ENOG410YGAZ) |
| Kegg | Link to kegg annotations (AT3G19770) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415562.1) |
| Pfam | Vacuolar sorting protein 9 (VPS9) domain (PF02204.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |