| Id Trinity | FTRINITY_DN52471_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_87237 |
| Sequence | GAAAAAACCCCTAATCCCATTACCGGCACTACTGAGTGTGTGGAAGATGGTTTCAGAGTATGGCCTCAAACTCGCGGTTCACCTCATCACCACTCACTTC GGCAACATCGTCGCTAATGTATGCGAGAATCTTCTTAGAAAAGGACCTCTCACTTTGGACCAGTTGATTCGCTTCACCGAACTCAAAAGAGAGCAAGTCA AAAACTCTCTCCTCGTCTTAGTTCAACACAATTGTGTTCAGCCTTTTCAAAACCAACAACAACAAGATGCTGCTAAAACAGAGTACATGGCGTTGTTTGA CAATATACTGCATCGACCTAGGTTTCCTAAATTTTTGGACATTGTGTCGCGCAAACTTGATGATGAATGTGTAGAGCTTCTTGATGGATTGCTTCGCAAT GGTAGGCTTACGCTTCAACAGATGGCTGACAGGGCCAGTGAAGGAAAAGAAAATCCTGTGGCTATAGATGTTGTGCGAGAGAGCCTTTGTAAACTTTTGG CCGGTCAATATGTTGAACGCTGCCCTGCCCCTGAGCCAGTTCTTTTTCCAGTAGTTGAAGAAACTACTACCAGGAAGCGGGGTGCTAAGTCTGCTAAGAT ATTCCAACCACCTCTAACTATAGAACAACGCGTTCTAGAAGTATCAGTGGCTGGGGAATCAATCAGATTTTCACTCACAGCAGATACAGGATTTAATGCC GACAGAGAAACAAATTCTGATGATTGCCCCATGACAAGTGTTGAAGATGCTGTAAAAGAAGAGCTAACTCCTTGGCGTGCAAACTTCGAAGAGTTTATGC GTCATCTTAGGCATAAGGCATTGATTGAGAATGTAAGAACTAGGCTGGATGAAGGAGCTGCTACTATCCTAAGTGCAATACTAGATGCTACTAGAACTGC AGAGAGAAAAGTGAAAGTACAAAATTCAGGTGAACAGATTCCTTATATCACGTAATTTGAAATTATGTTGTTAATTTTAATAGGTATAGTTTATGGTGAT TGACCCAATGCTTGTGCCATCTCCGGTTTCACTTAATCTCTGGCCCGTTTTTCAATTCAAAGATTTATATTACCAAAAGAAAAAGCTAATGAGTAGTCAG TCATTTTTGAGTCAATCATATGGCCTTTTCAATGGGGTTTCCCCAACAGATAAGTTGAAGTATTGAGAAGATGCTCCTTTAATTTGCTGCTTATTATATT GTCCCTTCTCTTTGTAATTTGCTCTTTTTGTCCTATTGTTTTATCAATAAAAAAAAAACCTCCACAAGTGTTATCTCTTGGCTTACACTATACTATGCTG TATTTCAGTGCCCTTATCACTGGAAGCAATTTTCACCGAGGTGGTGAAGAGTGAAAATGGCCGTACTATGACCATAGATCGTGTTAAAGCTTCTCTTGTC CAGTTGGGCTGTCCATCGAGGGTGCCTGATGATTCATATACTATTGATTTGAAGAATATTATTGAATTGGCCCGAAATGATGAGGTTGAGTCTATTGTGC TGAAAAGGTATGGACCTTATGCATATAGAATGTTCAGGCTACTGTCTAAGGCCAATTGTTTTCTCGAGACAGATAAGATAGCAGAGTCTACTCTTGTTGA GAAAAAGGAAGCTCCAAGGTTACTACATGGATTATGGAAGGATAACTACTTGCATATGGAGAAATTACAAGTGATGGCAAGTAAGCAATCAAGGTTTGTG ATGTGGAAAGTTAATAAACCTCAGCTATGGGATTATGTACTAGACGAGATGTACCATGCTGCCTTAAATTTGAACCTAAGACTGGGTTTGGAGCAAGAGA AGGATGTAGAGCTTTTAAGTGTTCCTCTAGACAAGATCAACGAGTCCAAATCGTTACAGAAGAAATTCGAGCGGAGACGAAGAGTCCGGTTACTCCTGGG ATCATCATTGATGAAACTTGATGATGCTCTCATGCTTTTCCATGACTTCTGAACATAACCACATATTTATTATGACATCTTCTTCTTCTTCAAGGAATAT AACAATGTAGCATTTTAATATGGAAACTACCTTATTACGAATGCAATACAACTATTCACATTAAGTAATGACAGGATGCAAATTTTGACTTGATAATTAG ATTTGGATTTAATATGGATTCTCTATTGGGTTTACTACTCACATATTAAAATGATTGTATGCCATAAAACTATCTGGAAACTTGGAAAGTTGAATAAATA TAAATGTAACTTATTTGTTAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_25772; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_87237
| Blastp | DNA-directed RNA polymerase III subunit RPC3 from Danio with 26.21% of identity |
|---|---|
| Blastx | DNA-directed RNA polymerase III subunit RPC3 from Danio with 25.53% of identity |
| Eggnog | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs(ENOG410XPVH) |
| Kegg | Link to kegg annotations (393201) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442132.1) |
| Pfam | RNA polymerase III subunit RPC82 helix-turn-helix domain (PF08221.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |