Ll_transcript_87242

• Id Trinity: FTRINITY_DN52471_c0_g2_i6
• Name Transcript: Ll_transcript_87242
• Sequence: GAAAAAACCCCTAATCCCATTACCGGCACTACTGAGTGTGTGGAAGATGGTTTCAGAGTATGGCCTCAAACTCGCGGTTCACCTCATCACCACTCACTTC GGCAACATCGTCGCTAATGTATGCGAGAATCTTCTTAGAAAAGGACCTCTCACTTTGGACCAGTTGATTCGCTTCACCGAACTCAAAAGAGAGCAAGTCA AAAACTCTCTCCTCGTCTTAGTTCAACACAATTGTGTTCAGCCTTTTCAAAACCAACAACAACAAGATGCTGCTAAAACAGAGTACATGGCGTTGTTTGA CAATATACTGCATCGACCTAGGTTTCCTAAATTTTTGGACATTGTGTCGCGCAAACTTGATGATGAATGTGTAGAGCTTCTTGATGGATTGCTTCGCAAT GGTAGGCTTACGCTTCAACAGATGGCTGACAGGGCCAGTGAAGGAAAAGAAAATCCTGTGGCTATAGATGTTGTGCGAGAGAGCCTTTGTAAACTTTTGG CCGGTCAATATGTTGAACGCTGCCCTGCCCCTGAGCCAGTTCTTTTTCCAGTAGTTGAAGAAACTACTACCAGGAAGCGGGGTGCTAAGTCTGCTAAGAT ATTCCAACCACCTCTAACTATAGAACAACGCGTTCTAGAAGTATCAGTGGCTGGGGAATCAATCAGATTTTCACTCACAGCAGATACAGGATTTAATGCC GACAGAGAAACAAATTCTGATGATTGCCCCATGACAAGTGTTGAAGATGCTGTAAAAGAAGAGCTAACTCCTTGGCGTGCAAACTTCGAAGAGTTTATGC GTCATCTTAGGCATAAGGCATTGATTGAGAATGTAAGAACTAGGCTGGATGAAGGAGCTGCTACTATCCTAAGTGCAATACTAGATGCTACTAGAACTGC AGAGAGAAAAGTGAAAGTACAAAATTCAGTGCCCTTATCACTGGAAGCAATTTTCACCGAGGTGGTGAAGAGTGAAAATGGCCGTACTATGACCATAGAT CGTGTTAAAGCTTCTCTTGTCCAGTTGGGCTGTCCATCGAGGGTGCCTGATGATTCATATACTATTGATTTGAAGAATATTATTGAATTGGCCCGAAATG ATGAGGTTGAGTCTATTGTGCTGAAAAGGTATGGACCTTATGCATATAGAATGTTCAGGCTACTGTCTAAGGCCAATTGTTTTCTCGAGACAGATAAGAT AGCAGAGTCTACTCTTGTTGAGAAAAAGGAAGCTCCAAGGTTACTACATGGATTATGGAAGGATAACTACTTGCATATGGAGAAATTACAAGTGATGGCA AGTAAGCAATCAAGGTTTGTGATGTGGAAAGTTAATAAACCTCAGCTATGGGATTATGTACTAGACGAGATGTACCATGCTGCCTTAAATTTGAACCTAA GACTGGGTTTGGAGCAAGAGAAGGATGTAGAGCTTTTAAGTGTTCCTCTAGACAAGATCAACGAGTCCAAATCGTTACAGAAGAAATTCGAGCGGAGACG AAGAGTCCGGTTACTCCTGGGATCATCATTGATGAAACTTGATGATGCTCTCATGCTTTTCCATGACTTCTGAACATAACCACATATTTATTATGACATC TTCTTCTTCTTCAAGGAATATAACAATGTAGCATTTTAATATGGAAACTACCTTATTACGAATGCAATACAACTATTCACATTAAGTAATGACAGGATGC AAATTTTGACTTGATAATTAGATTTGGATTTAATATGGATTCTCTATTGGGTTTACTACTCACATATTAAAATGATTGTATGCCATAAAACTATCTGGAA ACTTGGAAAGTTGAATAAATATAAATGTAACTTATTTGTTAAAAAA
• Tissue: flowers
• Gene name: LI_gene_25772;
• Additional information: details;

Expression of Ll_transcript_87242

FPKM

• FPAB: 6.7
• FPNAB: 11.6
• LF1: 6
• LF2: 6.1
• LF3: 7.1
• LF4: 8
• UF1: 5
• UF2: 5.8
• UF3: 7.3
• UF4: 7.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_87242

• Blastp: DNA-directed RNA polymerase III subunit RPC3 from Danio with 24.47% of identity
• Blastx: DNA-directed RNA polymerase III subunit RPC3 from Danio with 24.74% of identity
• Eggnog: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs(ENOG410XPVH)
• Kegg: Link to kegg annotations (393201)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442130.1)
• Pfam: RNA polymerase III subunit RPC82 helix-turn-helix domain (PF08221.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;