Ll_transcript_86795

• Id Trinity: FTRINITY_DN52474_c1_g1_i7
• Name Transcript: Ll_transcript_86795
• Sequence: AGTAAAGTAAGTGGGTGCTCCTCTTGCTGGGTGGAGTGGAGCTTTACGCAATTCCATTATTACACACTCCATCCACCAAAGAATCTTACTTTCTCTCTGT CTTATCTAATTTCCATTATTATTATTTTCTCTATTTTTTAATTCCATTTCCATTCCACGTTCCTTCTTATAATCATTACATGCCAAATCTTCTCTCAAAA CCCTTCTCTTCTCATTTCAATTTTTATAGCTAAATCATGATAACAGAAGAAAATTTATAAAAAAATAAAATAAAATCTTCTGGTAAGTTAGGTGAAAACT TTCTTCTCCATAATCAATGGGCAACGTTGGAAGTAGTAGCGGTGTTAACAACCGTCGTAGATCTAGCGGCAGTGGCAGTGGGCGACGGATTCATCCGCCG CCTCCGCCACCAGTGACGTCTCAGCCGGAAACCACGGCCAACCGGTACATGTACCCGGCGTCTGCCACCATGCCGTATCACAACTACCCTGGCTACTATC CCCCTCCACCGCCAACTATGCCGATGCCGTTGCCGGCTCCGTATGACCACCACCACCACCGTCCGGTGATGGACCCAATGTGGGGGCGATACCCGCAACC GCAGCTGCAAGTGCCGCCGCAACCGCCTTTGCCCTATGTGGAGCACCAGAAAGCGGTTACAATAAGGAATGCTGTTAACATTAAGAAGGAGACTCTGAGG ATTGAGCCTGATGAAGAGAATCCTGGGCGTTTCGTTGTGTCGTTTATGTTTGATGCCACCATTGATGGGAGCATCACCGTAATTTTCTTTGCAAAAGAAG GTGAAGGGTGCATCCTTACACCAATGAAGGAAGACAGTCTTCCACCTGTGACTGCAAATTTTCAGCAAGGTCTCGGGCAGAAGTTTAAACAGCCTGCTGG AACTGGTATTGACTTTTCAATATTTGAGGAGTCTGAGCTGTTGAAAGTGACTGACATGGATGTCTATCCTCTAGCCGTTAAGGCAGATGCATCCTCTCAC GATGGTGATGGATCAAATGAAACTCCAACATCTGGTAGCACAAACTTGCAGATAACTCAAGCTGTGTTTGAGAAGGAGAAAGGTGAGTTCCTTGTGAAGG TTGTAAAGCAGATCTTGTGGGTGAATGGAATGAGGTATGAGCTGCAGGAGATATATGGCATTGGAAGTTCAGTGGAGAGTGACTTGGATGGAAATGATCC AGGAAAAGAGTGTGTTATCTGCTTGTCAGAGCCCCGGGACACAACAGTCCTTCCCTGCCGCCACATGTGCATGTGTAGTGGATGTGCTAAGGTTTTGAGG TTCCAAACAAACAGATGTCCAATCTGCAGACAACCAGTTGAGAGGCTTCTCGAGATCAAAGTGGGTCCAGAGCCTGAAGAGTGAAGATACAAGTGTTTGT GACTCAAGCTTCCTGTACAGTCCAATTGTAATACTTAAAACTTTTCCCTTACCTTCAAAAAAGTGAATAATGGAATTTATATATATGTTGTTTGACATGG AGGCGTTGCTCCTAACTTGTATAATTCAATGCCTCCACTATGCTTGTTTGGTTTTACTTCTAATGTTTATATTGACATTCCTTCTAAATATAGTCAAATG CATTATTCACCTTCTCTTGGGACTTGACATCTTTCGGTTTTTCCTTTGTAATTGCATGTTTTGTAATCTTCAAAGAAGGATTGATATTATGGCTAGTATT TTATTATGTCTTCTTCAGATATCTTTTCTAGTTCC
• Tissue: flowers
• Gene name: LI_gene_25794;
• Additional information: details;

Expression of Ll_transcript_86795

FPKM

• FPAB: 12.7
• FPNAB: 13.8
• LF1: 13.4
• LF2: 15.4
• LF3: 15.1
• LF4: 16.2
• UF1: 13.6
• UF2: 16.1
• UF3: 16.9
• UF4: 18.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_86795

• Blastp: Probable E3 ubiquitin-protein ligase LOG2 from Arabidopsis with 73.31% of identity
• Blastx: Probable E3 ubiquitin-protein ligase LOG2 from Arabidopsis with 72.76% of identity
• Eggnog: RING finger(ENOG410XRAE)
• Kegg: Link to kegg annotations (AT3G09770)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432624.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13920.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;