Id Trinity | FTRINITY_DN52476_c0_g4_i10 |
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Name Transcript | Ll_transcript_86830 |
Sequence | ATCATTTTCTTATTCAAACAAAACAGAAGTAAAGTATCCATATATCTTATAATATATAATAATTTACAAGCACTTGAACACAGTTCTCCAATCACACACT CTTTGTTGATTTGTTATTTGTTGTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTCTTCTTCTTGCTATGGCTTCCATTAACAACTTCAA CCCTTTTGGTGGAAACTGGTTCCAAAAACCCCCAAACCCAATTCCACCCCTCAACACCAACATCTTCTCTCTCTCCGACCACCAAACTCCGAACTTCGCC GCCATCAGCCTCCGCAACCTCTTCCGCCGAAAGCCCAAACTCCCCGACGATGAACCGGGCCCAATGGAGCAAATGGTGTACCAGTTCTTCGAAGAATGTG AGAACCCACCAGACTATCGTCACACCCCAGAGGTAGAAAAGATTCTAAACGAAGACCCAATTTGGGAAAAGAGAGAAAACCCAACAGAAGAAGAGATAAG AGAAAACGAGGAAATGATTGAGATGATTAAGAATAGCCCAGTAGTGCAGTTTTTGCAGAGAGCAGAGGAAATTGCTGATAAGATCAATGAGATGGAGTTG AAGGAGAATGAGAGGCCTTACCATAAGGAAGATTGGGAAGTGTGGAAGAATGTGCCAAATGTGATTGGGCTTGATGGAAGGCCCATGCCTAGGAAAGCCC AGAAGAGTAGGAAAGAAGCTGATGACAAGTTTTGGGATTTTGCTAGACAGTTCTTTTTTGGGCTTTGGGGGTTTAGGCAGAGGCCTTACCCTGCTGGGAG ACCTATTGATGTTGCTCAGTCAATTGGGTATAAGAATCTTGAGAAGCGCTATTATGATTTTATCATGAGGAGTGGCGGATGGTACTACAAGGATCGACTG GGTCGTACACGAGGACCATGTGAGTTGATTCAGCTTAAAACTGCATGGGGTGCTGGGATCGTTGATAAGAACACTTTTATTTGGGGCGAGGATATGGATG AATGGGCGCCTATCCACATGATTTACGGAATGGAGCGTGCAATTGCCACTTGGGAAGGTTTCTTAAGTTCCATTCTTTTATTTAGCTTATGCATAGAGCA ATTGAAGCTAATTCAGTCGAAAAAGTTTCCAAATGTTCTTAAATAAATCAATTAATATTTATCAACAAATATTTTTTCGCATCTAAGAATGCCATCTATA AAACCAAACTGGCAAGCCTTGAAGCTTTAGTACTTGATAAAAACTGATTTCTGGTTCGGCATTTTTTTAGTTAGACTTGGTGCTGCAGCAACAGCCCTCC TTTTCAAACTGCAAAAAGGTATACCGCCATGGGTTCCGCTGAAGGGATTCGAAAAGAAGACTTATAAGCAGCTTCAAGAAGAGGCCATGGAAAGCAAGAG GCGTGATTTAGCAGTATTGGAAGCCAATGACGGTGTTTGGCCTGGAGTTAAAATTCCAAGTTATGCCCTATTTCTTTGGGCAAGTGGAACAGAACTGACT ACTATTTTGGAACAGGATCAAATTAATCACATGCCAAACAAATACATTCCCAGAGATCTTAGAAAGAAGTTGGCCGAAATTATACCAGGGTTGAGACCAT GGGAGGTTCTGAGCATGGAACAAGCGATGGATCAAATAACATTTAACGGTGAGTGGTACCGTGAACCACTTGGTTCATACACCACTGGTCCCCCATACAT CCAGCACTGGAATGAGGACGTTTTGAGGTTGTATAAGATATATGAAGATCTTTCCGCCGAGTTGTATGAAAAAATGGAGAAGACACTTCCTGGCTTTGAT AAAATTATGGAAAAGGTCCGGGTGGACTTTGATACAAGAATTAGCAAACTGGAGGAGAAGAAAGAGGCTGAGAAAAGAAGACGTGAGAGAGAAAACTATG CCTAAAACATTCCCTCGTGTAATTTATTACATTGTTTCTGCATGTTATTGTAAGACATTGTTGTGAGTTGTTAAATGTTTATGAATTTAATTACTTCGAA CTCATGATTTATGATAAAGGTCTTATAGAATTCTTGGAATTCACTTAAGGAAAGGAAGAATTCAAACAATAAGTAGCAGACATTCTTATGAAGAAAGGAG TCTCATTACACAAGGAACAAGATACGAAAAACTGGGTAGAAAGATTACAATTTTCGGAATTGTAAAAAAACTGAAATTAACTTATGCTACAAGCAACAGT ATGGTGAAAGTCACTTAGTACGCTGTTGTTGGGGTTGATTGTCAAGTTTCTAAAATAAAGAAGGAGGTTAAATATTAGTAATTGGAGAAGTCCCTC BLAST |
Tissue | flowers |
Gene name | LI_gene_25817; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_86830
Blastp | Protein TIC 56, chloroplastic from Arabidopsis with 63.49% of identity |
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Blastx | Protein TIC 56, chloroplastic from Arabidopsis with 65.22% of identity |
Eggnog | NA(ENOG4111F7B) |
Kegg | Link to kegg annotations (AT5G01590) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446533.1) |
Pfam | Domain of unknown function (DUF4339) (PF14237.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |