| Id Trinity | FTRINITY_DN52479_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_88321 |
| Sequence | CTTTCTCTTCTGGTTTCTATATTATTCATTCAAATACTCTTTCTCTTCTGGTTTCTATATTATTCATTCAAATACTCTTTCTCTTCTGGTTTCTATATTC CTCTCTTTCTCCATTCATTCAAATAACAATTCTCATTTCCATGGAAGACTATTCCTCTCTTTCTCCATTCGTATGTGATGGAAAGGGATGGAAACTGTGC TTTGAAGACTTTGTTTCAGGCTTAGGAGTGAACATAGTGACTATTGTTATGATTATTGTGATTGGATTTCATCACAACATTGGTAGAGGACAACCACAAC CACTTCCGAGATCACATGCCCAGAGGACCCTTCTGGACAAATTCTTCCTCGACCTTCTACCAGCCATCGGAGCATGTCTTTCGGTCTCACCCATAATTTT TCTGTGGAACAAACAACATAATACTCATTTTGTTGGATATAGCATGTGCTTTTATACCTCTTCTGAGTTCATCATATGGACAAATATCATTCTCTTCTCA AAATACTCCACCACTCATTCTGCACTCTTCAACCATGTATTATGCTATTGGTGGATCCTCAAATCAATATCAGCAGTCTACCATTTAATCATAAAGTTTC CATCACTTGAGGTTTCAATATGCATAATAGAAAGCTTAGTTGTTCTGGTGAATATCACATTTGGCATAGCTATCAATATAATCAGGACAAAGATACAATC TTCCAGAAGCAGCCCAATGGAAGATCCACTTGTTCCCAATAGTGTGGACCTTGAGGAAGGTAGCCATAGTGACCTTGGAAATAATGAGAAGTTTTGGGAT TTGATGACTTTCAAATTCATAACTCCAGTAATGAATCATGGTGTGGTAAAACAATTAGACTCTGAAGATCTGCTGCAGCTACCTACTGACATGGGACCTT CTTCCTGTCATGGCCTAATTTCGTCCTGCTGGAAAGCTCAGTTGAGTAGTAATGTTTCAAACCCATCCTTATTTAGAGCACTTTGTAGTGCATATGGATG GCCATATCTCCGCCTGGGTTTATTGAAGATGATTAATGATTGTATTGGTTTTGCGGGACCATTGCTTCTCAACAAGCTTATCAAGTCTCTTCAACAAGGT TCGGTGAGTGTGGATGGGTACTTACTTGCAATGTCTATGGGTCTCACCTCTATAATTAAATCCTTTTTAGATACGCAATATACTTTTCATCTTTCCAAAC TGAAGCTAAAGCTGCGATCTAGTATCATGACTCTAATCTATGAGAAGTGTCTATGTGTGAACCTAGCGGAGCGTTCAAAATTCACAAATGGAGAAATTCA GACATTCATGTCAGTAGATGCTGACCGAACTGTCAACTTGTGTAATAGTTTCCATGATCTGTGGAGCTTGCCTTTACAAATAGGAGTGGCGCTTTATCTT CTGTATACTCAAGTCAAATTTGCATTTTTATCTGGATTAGCCATAACCATTCTATTGATTCCAGTAAATAAATGGATATCAAAATTGATTGCAAGGGCCA CGGAGCAAATGATGAAGGAGAAGGATGAAAGGGTTCGTAGGACCGGAGAACTTTTGACTTATATTCGCACTTTGAAGATGTATGGATGGGAACTACTTTT TTCTAGTTGGTTGATGGAGACAAGATCATTGGAAGTGAAACATCTATCTACTAGGAAATACTTGGATGCATGGTGTGTATTCTTTTGGGCTACAACACCA ACACTCTTTTCTCTTTGTACATTTGGACTCTTTGCATTGTTGGGACATCAGCTTGATGCTGCCATGGTTTTTACTTGTCTTGCTTTGTTTAACACACTGA TTTCACCACTGAATTCATTCCCTTGGGTGATTAATGGATTGATTGATGCTGTTATATCCTCTAGACGGCTGAGTAGGTTTCTCTCTTGTCCTGAACATAA AGTGGGAGAGGCCAGTTACTGTTCATTCACGTTCCCAAGTAAGCAGCCTGATTCTGTACAAGATTCGGCTGTCAGTTTCGAAGATGCATGCTGTACTTGG TCAAGCGCTGATGAACGAACATTAAATTTGGTGTTGAATCATGTGACACTAAGCCTCTCCAAGGGTTCCTTTGTTGCAGTTATTGGAGAGGTTGGTTCAG GTAAGTCATCCCTGTTATATTCAGTTCTTGGAGAAATGCGGCTTGCTCATGGGTCTGTTTATTCCAATGGATCCATAGCTTATGTACCACAGGTTCCCTG GATTTTATCTGGAACTATTCGTGACAACATATTATTTGGGAAAGGCTATGATCCTGAAAGGTATGCAGATACATTGCAAGCATGTGCGTTAGATGTTGAT ATCTCATTGATGGTTGGAGGTGACATGGCTTATATTGGCGAGAAGGGAGTGAACTTATCGGGTGGGCAGAGAGCTCGTCTTGCTTTGGCAAGGGCAATGT ATCATGGCTCAGATGTTATTATGCTTGACGATGTCCTGAGTGCAGTAGATGTACAAGTTGCTCAATGGATCTTACACAATGCCATTTTAGGTCCTCTCAT GCGGGGGAAAACACGATTGCTATGTACCCACAACATTCAGACAATATCTTCTGCTGATATGGTTGTTGTAATGGATAAAGGACATGTAAAGTGGATGGGA AGTTCAGCTGAATTTCCGATTTCTTCATATACAGCATTGTCCCCATTGAATGAAATGGATTCATCTTTACAGAATCACACACAATCTTTAAACACAAATT TGTCTTCCAAATCCAAGGAGCAACCTCTTCCCGATAAAGTAATTATGCATGCTCTGGATGGGCCAGAGGACGTAATTGAAGTTGAGTCAAGGAAAGAGGG TAAAGTCGAACTTGGAGTGTATAAGAACTATGCTGTCTTCACTGGCTGGGTCACCACAGTTATTATATGTCTGTCAGCTATTTTGATGCAAGCTACTCGT AATGGAAATGATTTATGGCTGTCATATTGGGTTGATTCGACAACAGAAGGCAGCCAAACAAAATACTCTGTGTCCTTCTATCTGGTGATGAGCTGCTCTA TAGTAATAGTTTTCATAATCAGAGTTCATGCTTTGTTTCCTGTTTATAACATCCAAGACGAATGAATGGGAGATTATAATTTTTTTGAGATGATAATTAA TGCTGCAGGGTATACTTTCTCTCTTATGCATTATGAATTCCTTTTTCACACTGGTGAGAGCGTTCTCTTTTGCATTTGGGGGCATACAAGCAGCAACTAA GGTACACAATAGACTTCTCAGCAAGCTCGTCAATGCACCTGTCCAATTCTTTGATCAGACCCCAGGTGGAAGAATACTGAACAGGTTGTCTTCGGATCTT TACACAATTGATGACTCTCTTCCGTTCATCTTGAACATTCTCCTAGCTAATTTTGTAGGGCTGTTGGGTATTGCAATAATATTGTCATACGTGCAGGTCC TCTTCTTAGTCCTGCTATTACCATTTTGGTATATCTACAGTAAGCTCCAGTTTTTCTACAGGTCAACATCGAGAGAATTACGACGACTGGATAGTGTTTC TCGTTCTCCAATATATACATCTTTCACTGAAACACTTGATGGATCATCAACTATTAGGGCATTTAAATCTGAGGACTTTTTCTTTGCCAAATTCACTGAA CACATAACATTGTATCAGAAGACTTCCTACACAGAGACAGTGGCAAGTTTATGGCTTTCCTTGCGTCTCCAGTTATTAGCTGCATTTATCGTCTCATTCA TAGCTCTGATGGCTGTTGTTGGATCTCATGGCAGTTTGCCTATCAACTTCGGTACACCGGGGCTGGTTGGATTGGCCCTCTCTTACGCAGCGCCTATTGT ATCCTTGTTGGGGAGTTTTTTAACAAGTTTCACTGAAACAGAGAAGGAGATGGTTTCAATTGAAAGAGCCCTTCAGTACATGGACATTCCTCAAGAAGAA CAAGCTGGATGCCTAAAGTTGAATCCATATTGGCCAAATGAAGGAGTTATTGAATTCCACAATGTTACTTTGAAATATATGCCATCTTTGCCAGCATCAC TTAGCAATCTAAGTTTTACAATTGCACGAGGAATGCAGGTTGGATTAATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTAAATGCCCTTTTCCGCCT TACCCCAATATGTACAGGCTCCATCACAATTGATGGTATGGACACTAAAAATATTCCTGTCAGAGACCTACGTGCGCATTTGGCTATTGTTCCTCAGAGT CCTTTCCTTTTTGAAGGATCATTAAGGGATAATCTGGATCCATTCAAAATGAATGATGACTCAAAAATTTGGAATGCATTGGAGAAGTGCCATGTGAAAG AGGAAGTAGAAATGGCTGGAGGGCTGGATATTCTCATAAAGGAAGCCGGGATGTCATTTTCTGTTGGCCAGCGGCAACTCCTTTGCCTTGCACGTGCACT TCTCAAATGTTCAAAGGTTCTCTGTTTGGATGAATGCACTGCCAATGTAGACATTCTAACTGCTTCACTGCTGCAAAGTACCATATCCAGTGAATGCAAA GGCATGACAGTGATCACAATTGCTCACAGGATTTCAACTGTTCTAAATATGGATAATGTTCTTATTCTTGACCACGGTAGCCTGGTTGAACAAGGAAATC CACAAGTTCTTCTGAAGGATAACTCCTCTATATTTTCCACTTTTGCTAAAGCTTCATCCATGTAACCATTAATCATCAAAGGAGGCGTCTATAGTTGTTG ATGACATCAAACAAACTTCAAGTGTGGTTTGTTGTTGAGACTGTTATATAACATTGAAGACTAAAGAGTGTTAGAGATGATTCTCTTCAGTGGTATCATA TTAGGTGTTTTGGATCTTCTCTTTGTTGCTCAGTTTCTTCAAAAATAATATCATTGCTCAAAATAGCTTGTACACCACTGTCCATCAAAAGAATGTTGAA AAAAGCATCAGACAACATCAGTTATTTTGTCTTTCTAACTCAACTCTTTCATATGATACAAAATGTAATTCTTATTTTGTCTAGTAATCAAACTCTGAGT TACAAGATAGGATAATTATGTTTTTAAAAAACATTATTGTATCATATATCTGCTATTTCAATTCTAAGTATCGTGTAGTCATGATGAGAAGGAAAGGTAC TATAGTTTGTCCCTCATATATACATTCAAACTTTTCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_25840; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_88321
| Blastp | ABC transporter C family member 13 from Arabidopsis with 56.72% of identity |
|---|---|
| Blastx | ABC transporter C family member 13 from Arabidopsis with 57.85% of identity |
| Eggnog | (ABC) transporter(COG1132) |
| Kegg | Link to kegg annotations (AT2G07680) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436153.1) |
| Pfam | ABC transporter transmembrane region (PF00664.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |