Id Trinity | FTRINITY_DN52479_c2_g1_i2 |
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Name Transcript | Ll_transcript_88324 |
Sequence | CTAGCCTATAAAAAAAATAAAAAATAAAAACTCTAATTGGGATTTTAATGCCTTAATATTGTTTAGAAAAATGTTTAAACTTTGTGAAATTAGCAGGGCA ATGTATCATGGCTCAGATGTTATTATGCTTGACGATGTCCTGAGTGCAGTAGATGTACAAGTTGCTCAATGGATCTTACACAATGCCATTTTAGGTCCTC TCATGCGGGGGAAAACACGATTGCTATGTACCCACAACATTCAGACAATATCTTCTGCTGATATGGTTGTTGTAATGGATAAAGGACATGTAAAGTGGAT GGGAAGTTCAGCTGAATTTCCGATTTCTTCATATACAGCATTGTCCCCATTGAATGAAATGGATTCATCTTTACAGAATCACACACAATCTTTAAACACA AATTTGTCTTCCAAATCCAAGGAGCAACCTCTTCCCGATAAAGTAATTATGCATGCTCTGGATGGGCCAGAGGACGTAATTGAAGTTGAGTCAAGGAAAG AGGGTAAAGTCGAACTTGGAGTGTATAAGAACTATGCTGTCTTCACTGGCTGGGTCACCACAGTTATTATATGTCTGTCAGCTATTTTGATGCAAGCTAC TCGTAATGGAAATGATTTATGGCTGTCATATTGGGTTGATTCGACAACAGAAGGCAGCCAAACAAAATACTCTGTGTCCTTCTATCTGGGTATACTTTCT CTCTTATGCATTATGAATTCCTTTTTCACACTGGTGAGAGCGTTCTCTTTTGCATTTGGGGGCATACAAGCAGCAACTAAGGTACACAATAGACTTCTCA GCAAGCTCGTCAATGCACCTGTCCAATTCTTTGATCAGACCCCAGGTGGAAGAATACTGAACAGGTTGTCTTCGGATCTTTACACAATTGATGACTCTCT TCCGTTCATCTTGAACATTCTCCTAGCTAATTTTGTAGGGCTGTTGGGTATTGCAATAATATTGTCATACGTGCAGGTCCTCTTCTTAGTCCTGCTATTA CCATTTTGGTATATCTACAGTAAGCTCCAGTTTTTCTACAGGTCAACATCGAGAGAATTACGACGACTGGATAGTGTTTCTCGTTCTCCAATATATACAT CTTTCACTGAAACACTTGATGGATCATCAACTATTAGGGCATTTAAATCTGAGGACTTTTTCTTTGCCAAATTCACTGAACACATAACATTGTATCAGAA GACTTCCTACACAGAGACAGTGGCAAGTTTATGGCTTTCCTTGCGTCTCCAGTTATTAGCTGCATTTATCGTCTCATTCATAGCTCTGATGGCTGTTGTT GGATCTCATGGCAGTTTGCCTATCAACTTCGGTACACCGGGGCTGGTTGGATTGGCCCTCTCTTACGCAGCGCCTATTGTATCCTTGTTGGGGAGTTTTT TAACAAGTTTCACTGAAACAGAGAAGGAGATGGTTTCAATTGAAAGAGCCCTTCAGTACATGGACATTCCTCAAGAAGAACAAGCTGGATGCCTAAAGTT GAATCCATATTGGCCAAATGAAGGAGTTATTGAATTCCACAATGTTACTTTGAAATATATGCCATCTTTGCCAGCATCACTTAGCAATCTAAGTTTTACA ATTGCACGAGGAATGCAGGTTGGATTAATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTAAATGCCCTTTTCCGCCTTACCCCAATATGTACAGGCT CCATCACAATTGATGGTATGGACACTAAAAATATTCCTGTCAGAGACCTACGTGCGCATTTGGCTATTGTTCCTCAGAGTCCTTTCCTTTTTGAAGGATC ATTAAGGGATAATCTGGATCCATTCAAAATGAATGATGACTCAAAAATTTGGAATGCATTGGAGAAGTGCCATGTGAAAGAGGAAGTAGAAATGGCTGGA GGGCTGGATATTCTCATAAAGGAAGCCGGGATGTCATTTTCTGTTGGCCAGCGGCAACTCCTTTGCCTTGCACGTGCACTTCTCAAATGTTCAAAGGTTC TCTGTTTGGATGAATGCACTGCCAATGTAGACATTCTAACTGCTTCACTGCTGCAAAGTACCATATCCAGTGAATGCAAAGGCATGACAGTGATCACAAT TGCTCACAGGATTTCAACTGTTCTAAATATGGATAATGTTCTTATTCTTGACCACGGTAGCCTGGTTGAACAAGGAAATCCACAAG BLAST |
Tissue | flowers |
Gene name | LI_gene_25840; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_88324
Blastp | ABC transporter C family member 13 from Arabidopsis with 67.67% of identity |
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Blastx | ABC transporter C family member 13 from Arabidopsis with 67.67% of identity |
Eggnog | (ABC) transporter(COG1132) |
Kegg | Link to kegg annotations (AT2G07680) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436154.1) |
Pfam | ABC transporter transmembrane region (PF00664.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |