| Id Trinity | FTRINITY_DN52494_c1_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_88443 |
| Sequence | ATAAATTGATTCGTTTGATTTGTACGTGGCTTAAAGGTTGGTAAAGCTCCTAACAAAATCACTAAAATAAGGGAAATAGTATAAATAAAAGCACTAGGAA TGTGTTCATAAATCATAATGAAGAGGTTGAGTAGTGTCTACGACAACATATTAAAGTGTAATGTTTTGATTTTATGAAAAAAGAGAACAACATATGAGGA CAAGTTGTGCACTAAAGTCAGTGTGTGTTTCTAGACTTTGGCTTTTAAGCAGTAAGATAAGCTTGGCTTCCCTCTAAAGAGTTGAGAAAAGATGAATGGT CCTTGTTAATTGTGCAAAGACAAGGCAATAGAGAGATTCAGCAATTGTAGCTGTAGTTTTAGTTGTGAAAGTTGAATATGACAAACATGACAACAATGAA GCTGGTTTTGGTGGCAGTTGGATTTGCATGCTTACTTTCTGGGGTTATTTCCTTTGGATCTGACACTCTCTCTATGCTTTCCTTCTTAGAAAATGGTGCT GTCTCAGTTTCTAGTACAAAGCCTTCTTCTTTACCCCAACCTGTCATGGTTGGCCTCACTCTTATTGAGGGAGCTGCTTCTACAGGAGCTGTGTGTCTGG ATGGAACATTACCTGGTTACCATTTGGATCGTGGATTTGGATCCGGTGCAAATAGCTGGCTTGTTCATTTGGAGGGAGGAGGATGGTGTAATACCATTAG AAACTGTGTCTACCGAAAAACTAGTCGTCACGGTTCCTCAAATTATATGGAAAGTGAAATACCATTCACAGGAATATTGAGCAATAAAGCTGAAGAAAAC CCTGATTTCTTTAATTGGAACAGAGTCAAATTAAGGTACTGTGATGGGGCATCTTTCAGTGGCGATAGTCAAGATGAGTCTGCACAGCTTCAATTCCGAG GACAAAAGATATGGCTAGCTGCAATTGAGGAATTAATGTCCAAAGGAATGCAGAATGCTGAACAGGCCCTTCTCTCCGGATGCTCCGCGGGTGGTCTGGC GTCTATAATACATTGTGATGAGTTCCGGAACTCGTTTCCAGAATCTACCAAAGTTAAATGTTTGAGTGATGCAGGATTTTTTCTTGACGCAACTGATGTA TCTGGAGGCCGCACGCTGAGGAATCTGTTTGAAGGTGTAGTTCAGTTGCAGGTGGTATTTAATGTAGTTTTGTAGTAAAAAAATCTGAATAAGACTATAA TGTTAGTAGATTCTGGTTCTGACTTCTGGTCTTATAGAGGATTTGTAATATGTCAAAGATAAATCACTATCCTAATACTTAATACTTGAGTTATTAAATG AGGGCATATGAATGATATTATATCTATAGCACAACCATAGAAATATATTAAGTGTTTTACTTCTTTGATGCATGGTTAAAAAAACCTGTACAAAGATGTT ATGTAGCTGATGTTTTGAAAAGTGAAACTGTAGGAAGTACAAAAGAATTTGCCAACTAGTTGTCTCAACAAATTGGATCCCACTTCGTGCTTCTTTCCTC AGAATATGGTTGAGCATGTTGAGACTCCATTGTTTATACTCAATGCGGCTTATGATTCATGGCAGGTTCAAGCCAGTTTAGCCCCACCTTCAGCTGACCC CTTTGGCTATTGGAATGACTGCAAATCAAACCATGCAAATTGTAGCTCATCTCAAATTCAGTTCCTCCAAGACTTCAGAGTTCAATTGCTAAATGACTTG AAAGACTTCTCAAGTTCATCTCAAACCGGGCTATTCATAAATTCTTGTTTTTCTCATTGCCAGTCTGAGAGACAAGGGACATGGTTTTCTGATGACTCTC CCCTTCTTCGGAACACGCCAATTGCAGTTGCTGTGGGAGACTGGTATTTTGATAGAAAAGATGTCAAAGCTATTGACTGTGCCTACCCCTGTGATAACAC CTGTCATCATCTGGTTTTTAAGTGAGACAAATTTATTGTTTCCTGATATGGTAATATGATATTTAACCTTTCATCCTTGTAATTGTCATTTGTGCATTTA ATATTCATTAATTGTTATGGAAAGAATGCTCTTGCATGAGGATGTAATGACAATTGCTTATCTATTTATTTTCACTGATAATAAGTCATGTCAATAATAT TCATGTTTCCCCTTGCTAATTTTAGCTCATTAAAATATCTTCAATGATTTCAATATGTCCTGCACAAATGGTGTCCTGAACCATGCAATAATTCATTTTA CACCCAAAGTGAGTTCCTCACTTGTGAGTAGTAGGGATGTTCTCTTTAACATTGAGATCCTATGTACAATGTACTTCAATGAAAACAGTCATGCATCTAA CATGGCTCACTACTAGAAAAGGCGACAAGGGAAAATTAATAAATCTAATTATTTTTCCAATAGAAGCCATGAAAAGACCAAACATTGGATCTAAAAAAGT AAATTATCAAATATGGTTCTTCATTAGTGTCATTGCAAATTGGCTCTTTGGACTTGTGTAGAGATATGACTATATGAGTTGATCAGATGAAACAAAAACT ATATACCAAGAGGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_25936; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_88443
| Blastp | Pectin acetylesterase 12 from Arabidopsis with 66.67% of identity |
|---|---|
| Blastx | Pectin acetylesterase 6 from Arabidopsis with 65.48% of identity |
| Eggnog | pectinacetylesterase(ENOG410XQKD) |
| Kegg | Link to kegg annotations (AT3G05910) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427884.1) |
| Pfam | Pectinacetylesterase (PF03283.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |