| Id Trinity | FTRINITY_DN52505_c4_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_252250 |
| Sequence | CCCAAATCAATATCTCATTCTCACCCTACCAAGTTAAAAACTAAAAAGTTATTTCAAAATTCAAAGTAAACCCATCCTCAACCTTAATTACCAGAAAGTA CTATGTTTATGCATCATAGAAACGTAATAGCCTAGCCGGTACTCACAGAAGCATACAAAGTGAACAAAGACCAAAAGGAAAAGCATTATTCACACAACAA AGGCCACAATTTTCAAAGGGTTCTGCAACTTTTCACTTTCACTCTCACAACACTCTTTTTTCCCATGGATTACCTTAAAACCGCGCTTCCTTCACAAATC ATGTCAGAACGGGGTTCCAATCTTGTTGTTATAAACCCAGGTTCTGCAAATATTAGAATTGGCTTGGCTTCACAGGATACCCCTTATAACATTCCTCATT GCATTGCTCGCTATACCAAACAAGTTCCTAAGAGGAATGTTCAAGATCAGATGCTTAATAGTCAGGTTACAACTGCACAGCACATGGAAAGGGAGAAAGC TTATGATGTTGTTGCATCACTTTTGAAGATACCATTTCTGGATGAAGAAGTTCCCACTAATTCTTTCCCTCGTAAGATGGGACGTGTTGATGGACATAAC CCACATACTATTAGGAAAGATTTGCCCTTCACCTGGACTAATGTTTATGAGGAAGCCATTACTTCATCATCTTCAGCAGTAGAGAGTTCAAGTAAAGATG TGAAAATTGAGTCTTTGGATCCGAAAGAAGGTACTGATTCAAAGGAGTCGGATGTGAGCAAACAAAAATTCAGGGAGTTAATTTGTGGTGAGGAAGCATT AAGAATACCCCCATCTGAACCATATTGTTTATGTCGTCCAATCCGCAGAGGGCACTTGAATATTTCACAACATTATTCCATGCAGCAGGTACTTGAAGAT TTACGTGCTATTTGGGACTGGATTTTAATAGAGAAGTTGCATATTCCTCGCAATGAAAGAAATATGTACTCTGCTATTCTTGTGATGCCAGAATCATTTG ATAATAGAGAAATAAAGGAAATGCTATCTTTAGTACTGCAAGAACTCTGCTTCGGCTCAGCAGTAGTACACCAGGTAATATCTTGCTGTTATTAGTTTAT ATGTTGATCATCCTGATTATTTTTGTTGCTGTTGTTAACATTTTAAAATTACTTTTGGGGGTATACCAAACTCCTTTTACACCTGTGAACTAATGGCTAT CACCGGCAAGCTTCATTCTCGAGGAGTGGGTTAAGTCCCTTGAGATTGGACTCAAGCATTTTGAATCGAGGGAACTGAAGGGATGTGTTAAGATAAGCAG TTGTGGTTCTCAATTGGGGCATACTCTTTTCGAATTTTCCCGAGTCTCATGCATTTTGTACATCTTTTTCAAGATTTCTCCAGTAGTTTCTAATAGCTTC ATATTGAATTGGTTGGCCAGGAAGGTCTTGCTGCAATTTTTGGAAATGGATTATCTACAGCTTGTGTTGTAAATATTGGTGCTCAGGTGACATCAATGAT ATGCATAGAGGATGGAGGTACTCTGCCTTCAACTTCGAAGACTTTACCTTTTGGCGGTGAGGACATAGCAAGGTGCCTTCTCTGGACCCAAAGGCATCAC CAGACATGGCCACAAATTCGTACAGATATTTTGACAAAGCCTATAGATTTGTTAATGTTAAATCAACTGAAAGAGACATATTGTGAAATCAAAGAGGGGG AAGTTGATGCTGTTGCAGTAGTTCATTCCTATGAGGACAAAGTGCCAGTTGGGACTCACAAGACAAGGCTTACTGCTCTTAATGTTCCTCCTATGGGGTT GTTTTATCCAACGCTTTTCGTTCCGGATGTGTATCCTCCTCCGCCTCGTACCTGGTTTCATGACTATGAGGATATTCTAGAAGATACATGGAATATTGAT TTTTCCCGAAGGTCTGACATGTCAGATACGTTCTATCCCAATTTTAATGGAGGGTTACCCATGTGGGAAAACTATCCAGTTTTTTCATCTAAGCCAAAAA AGGAAGAAAAAGTCGGCCTTGCAGAGGCTATTACTAACTGCATTCTCTCAACTGGGCGCATAGACATCCAGAGAAAATTATTTTGTAGCATACAATTGAT TGGAGGGGTGGCTTTGACAAGTGGTTTAGTTCCTGCGGTAGAAGAAAGGTTGGTTTTGATTTTGGTTTACCTTAGCATATCTAACGACCCAATTACAGTT GTGATCTGATGTTTTAAATGAGTATGTATTCGTTCGCAATTTAAGTAAGATAAGAACTAGCCATTGGTAGGTGATTTGTAAGGATTATAGTAAGCTCTCA CCAAGGCTTGTGGCATGCCTTGACCTCTGAGCTGAAACTCTCTTCTCCTCTAAGCTTCTCTTATCCCCAAAAATAAATTGAGATTATCAGCATCCTTGAC AAGTTGACAGTGTGACATTGTGAATGTAATAGCTACATCGATAAAATGCTTTTGTGATTCTTAATGTTAGATGCTGGAAGGAAATGCAATGTTGTTAATT TAACGACCTCAACATGACTCCAATATTAAAGTAAATTTTGTGGTAGCCCAATAACTGAAGGTAGACGGAAACCATGAGAAACTTAAAGTGAAATCATTAA AAAGGATTTAGATCATAACCTTATGTTGAAAAATTTGGTTTTTGACGGAACATGGTAACTTGTTTGATCCATGTGGTTGCTCCTTTCCATGGAAAATGCT TAGGTGGAGGTTGTATTTTTGTTGTCAAATTTGAACATCCCAGTTCTTGAATGATTTTGTTAATTATTTCATTATATTAAGCTGATGGGTCTGTTCCACT ATCCTTATATGTCAGAGTTTTACATGCCATTCCTCCAAATGAAGCAATCGATACCGTGGAGGTTCTACAATCAAGGACAAATCCAACGTTTGTGCCATGG AAAGGCGGAGCGATTCTGGGAGTACTTGATTTAGGTAGGGATGCTTGGATAACTCGGGAGGATTGGATTCACAATGGACTTCACATTGGAAGCAACAGAA AATACAAGGATTCTTATTACATTCAAGCTCAAGCTATGTGTTATATGAATTCTTGAAAGGTTGGTGATACTACTTTGAAAATATAAACAAAGAATGTTAA TGATATCTTAAATAGGCTCTACTTGATTACTTAGTTTCAGGCAAGTGCATGCATTCTTATCCACTGCATTTCTTGTCAATGTTGTAATTATTCTACCATG GGATCAAATCAGTTCAATTGTTTTTGAAGAGTGTTTTATGGTCTGAATTATGGATATTGCTTTGAGACTGTAACTACTAATGGAAATTAGTGGCTATTGT GTTAGGTACATGATTATTTGATCTTAATGGTTGAATATGAATTAAATTTCATTTGAAAATGAAGGCCAGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_26027; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_252250
| Blastp | Actin-related protein 9 from Oryza sativa with 57.61% of identity |
|---|---|
| Blastx | Actin-related protein 9 from Arabidopsis with 65.06% of identity |
| Eggnog | Actin-related protein(COG5277) |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0001098) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428861.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |