Id Trinity | FTRINITY_DN52508_c0_g3_i2 |
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Name Transcript | Ll_transcript_252521 |
Sequence | CAAACATCTACATAATTATGTCCACAAGATTTCTCTACAATCTTGCCTAAACCCTAAAACTAACGTAGCTAACATTTTATAGAAATCACCATCACTATAA ACCAAGAGCTCCACCGTCATCAACTCCGAACTCCGCCGTCGTGCTCTCTAAACTCACCATTCGGGATTTCTTCTTCGTGAACCCATCACCATCACGCGAT TACTTCTTCACTCTTTTTTGTTAGGTAACTATTCCAACTCTGTTCATTTTTTAGAAAACAATTTGAAGTTTTATAATTTGGGGGTTTTACATTTCACAGT TTGGGAGTTTTGGATTTTACAATTCCAACCCTAATTTTTTTCATATAATATGTGGTTTTTGATTCCTCATGAAATGTTTAATTAGTCTCCATATATATTT AGTGCCGTTACTGTTGAAATTATCATATGGCTAAGTAATTAGTATGGTCTGGGTAAAAAGAATTGTCTACCTCTCTAATTGCACATTGATGCACCTTGTT TTAGGTTTACATGATAGAAACATTTCAAATTTTGGTTATTACGTATTTGCTTAAGGCTATTACATCTTTATGTGGTTTAAAATTTCAAAGCCTGCATATA GAGAGAGAGTGAGAGACTGTGATGGTGTTTAACTTTTTAGCTGCATCTTATGTAAGACGAAGATCTTCATTATCTCTCCTCCTTTATATTATTCATTTGA AAGGTTATCCATCTTTCCTTTATAAAGATATATGGGTGCCTCTTCCATTAAAGCAGAGCCGTGGTTAGTCGTTTTGGCTGCTAAACCCACTGTATTGTTG TGTTTAACTTGCCAAAAAGGAGGGGCGTGCTTGAATCATATAACCTGCTAAGAAGAGAGAAAAACTAAATATTTAGATTTTTTAAAGGGATCCAGGGGCT ATCATAACCTTTTTTTTTATATTTGAAGAAAAAGATAATCCCTCAGTGGTTTATTATGGAGATTTCACTTACCATTTTGGTGGTAAGTTTCTTAATGCAT ACAGCATTGGTTTTTTAAGTTCTTTTAATGTCAATTTCTTCTGAATTTTGTCTTGATCAGTTGGTTGTCCTGGTATAGTTCAAAATTTTGTAATATTTGA TATAGTTAGGGGTTCTATAAGCAGTGGATTAAATATATGTAGTATCCTTTCTGGAAATAACGTCTTCAACTCAGTGAAGTACTAATCCAGTGACAGTAGT TGGTTACAATGCAAAGCACGGAAAAAGGTTCTATGATTCTTATATTTTATAATTAAGTCATTAGAAAAATATTTTTGATTAAGGAATCAGTTTTTTTGCA GTAACCAAAGCAAAGGACATACAAATACAATATGTAGTTTTAGTATTGGTAAATGCATCTTTCGGGGACTGTATGATGTGCACAGTTTGCATGGAAGATG GGCTGAAATTGAAAGAGTAAATGTCTTCCCAAATTATACTGCTGCTGCCTTCAAACAAATTGACAGAAAATATATGAAAGCAGTAGACAGCTTAGATTGA CTTCTAGAGTGAATGGAGTCAATGGACAAAATCTTGGGTCATCAATGAACATGGGAAGAGGGAGGAAGAATTTGAAGAGGGCATCAGAGGAAGAGCATGT GACCCTTCAAGATGGCCAAACCATCATGCAGGTTCTCTCTCTTCGTGGCTCCAATCTCATTGAGGTAATGGATGCACATGGTGAGAAATCACTAGCTCTT TTTCCTGCCAAATTTCAGAAAAGCATGTGGATGAAACGAGGGAGCTTCGTTGTAGTTGATGAAAGTGCAAAAGAAAAGGCTCTTGAATCAGGTTGCAAGG TTGCATGTATTGTTTCTCAAGTTCTTTTCTTCGAACAAGTTCGGGAACTTAAGAAATCTCCAGAATGGCCTGAAATTTTTAAATCTGGGATAGGTGATTC AAATGAAAGAACCACATCCCAACAAGAGAAGAAGATGGTTAAGAGTGATGATGATGATAGTGATAGTGATGGACTGCCCCCACTAGAAGCCAATACAAAC CGGATAAGACCTGTTGAGTTGCAAGCTGATGATGATTCAGAATCTGGTTCGGATACAGATACTTGAAATCATAGTTCGATTCTCTGTGTTGCAATGAAAG ATTATTTTCAAGTTCAACCGTCCCATCTTCTAATTAGATTCTATATTTACATATTTTGACTTTCAACTAAAAAAGGAATTGAATTTGTATTAACATGTCA AATTGTAAATCACAGACAGCTTCTTTTTAAGTCATTTGTTTGATCAACTGTCTGTTTGATGTGTTTTTCTTCTTAATGTTTGACCTTTATAGTTACTTCA TTTTTATCACATTGTACTATGTATTGATCTGGTAGTCAGCCGAAGCAATGGAGATTTCATCTTATGACTGTTAGACGAAGGCCAGTCTTTTCACATTGAG TTTGAAGTGCCTGCAATTTCATCTGATGGTTGCACTTATCAATTAGTAGTCTGGGAATCAAGCTACAGTGGACCTATGTAGTTTCCATATACATGACAAA ACTATTTCAACTAAAAATTACATAGAACTTAGTTGTATATACTTTTAATAAGTGATCAATAAAAGAAAAAAATTATAGCTGTTTGGGTGGAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_26045; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_252521
Blastp | Probable RNA-binding protein EIF1AD from Bos with 36.72% of identity |
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Blastx | Probable RNA-binding protein EIF1AD from Bos with 36.72% of identity |
Eggnog | eukaryotic translation initiation factor 1A domain containing(ENOG4111N6Z) |
Kegg | Link to kegg annotations (615726) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019414213.1) |
Pfam | Translation initiation factor 1A / IF-1 (PF01176.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |