Id Trinity | FTRINITY_DN52511_c2_g2_i5 |
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Name Transcript | Ll_transcript_252839 |
Sequence | GTTTTGAATGAAAGGATTGTTCATAAAAAATAAAACAAGCTCAAAATAACAAATTTGTCACTTATTAGTTATATCGAGCTTGATCTAATCGAAACTTCTA GATTACACGTAACGAAGGGAACCAACCCCACGAAACCAAACCCATTCTTCGTGTTTCACTTATTACTCCGGCAATTGAAAAAGAAAACCCCAAAACCCTA GAAATTCTAAATCCCTACACCAGAACCCTTCCAATCTCCACTTCATATCTAACTTCACACTCGAATCTACAGAGAGAAATCTGAATCAAGCAATGGATTT CGACGAGTACGAGTATCTGGAGAAGACAGTGGAGGAGCAAGAAGACAACGATTCCTCGAAGAAGAAGGAGAGCGAGAGGAGTTACCGGAAACGCGATGTC GACGATGATCTCGACGCCGCCGATGACCGCCGCAGGAGCAAGCGGTCGAAGGACGACGACGAGAACGGTTCGTCGAAGAAAGATAGGGATAGGGATAGGA GCAGTAGAGAGAGGGAAAAGGAGAGGGACAGAGATAGGAGCAGCAGAGAAAGAGAGAAAACAAGGGATAAGGATAGGGATAGAGAAAGGAGGGATAGGAG AGATAGGGATAAGGATAGGGATAAGGATAAGGTTAAGGATAAGGATAAGGATAAGGAAGAATGTGGAAATGTTAATGTTAATGTTGGAAGTTTCATGCAG ATAAATTCATCAAGATGGCCTAAAGATGAAGTAGAAGCTTTGATTAAACTGAGGACAGAGATGGAATTACAGTGTCAAGGTAATGGATCTAAGGGACCTC TTTGGGAGGAGATTTCTTCTGCAATGAAAAGTATCGGGTATGATAGAAGTGCAAAGAGATGTAAAGAGAAATGGGAGAACATAAACAAATATTTCAAGAG GATGAAGGAGAAGAATAAGAGGAAGCCTGAGGATTCAAAAACATGCCCTTATTATCATCATCTAGAAGCTTTGTACTGTAATAACAAGAAGCCTAAGAAG GTGGATGAATCAGGTGGTAGTTCTAGCAATGAGTTGAGACCTGAGGAGTTGTTATTGCATATTATGGGAAGTCAAGAAGAGAAACCAGAACAACTAGAGT CATCACCTGAAAATGGTGAGAGAGAGAATATGGATGATCAAAACCAACATGGAGATAATGAAGATGAGTATCAAATGGTTAATGCTAATAGTCCTTCCAT AGGAATCATGAGTTGAAAACTTGATTTTTGAAGAGACTATTCAAATGTTGAAACTTCTTATGTCACAGCCAATGTGGGGTTTGATCTTTAGTCTTTTCAA TGCTTGAATCAAACTTGGGTCAGTGAGGGTTGTGAGGGATGGATTGGTGTCATAAAGAAGAGGTGTACTTCTAAAGAGAAGTAAGATTGTCTTGCTATTC TTGGTATAATACAGTACAAACTAATCTCATAGGCAGTGACTTTTGTATGTACTATATTTAAGATTATATATATTACACATTATATCTTCAATCAGTTTTG TTGGGTGAAAAAATGAACACGGAGAGGTATGTGGGTAAAAAGAATAAAGTTTTGGGAGTGTAATTTAATATTATAAAGTTTTCCTAGAAGTTTGTAAACC CATGTGCATGTGTGCTCAGGTGGGAAATGAATGAATCAGCTTATTTGTTTGTGGCAATAAAGAAAGATGTGTTATTTAAATAGTTTAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_26066; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_252839
Blastp | Trihelix transcription factor GT-2 from Arabidopsis with 71.43% of identity |
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Blastx | Trihelix transcription factor GT-2 from Arabidopsis with 71.43% of identity |
Eggnog | chromatin binding(ENOG410YBXG) |
Kegg | Link to kegg annotations (AT1G76890) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019430909.1) |
Pfam | Myb/SANT-like DNA-binding domain (PF13837.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |