Id Trinity | FTRINITY_DN52528_c3_g1_i13 |
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Name Transcript | Ll_transcript_252483 |
Sequence | ATGAACTATTTGGTTTGGTTCCATGTTTTGCTTGCTTTATAAAAATAAATCTCCTTTGTCTATTTCAACTACCATTTTAGTTAGTAAGCTAACATCTAGA CTTCATAATTTGAAACATAGTTGATATGCTTAATTGTATAATACAAACCAAACAAGTCATACTAAAAAACTTAGCTAAAAACTAAATTCGATCACTTTTA TCGATTATATTCGATCGCACTATTTTCGTGATTTAATTCGAAATCGCTTAACATATTGCGAAGGTTTATTGGTTTGTGTTGAAATTGGAAGGGAAATGGG CACTCGAACAAATTTCTACAAGAATCCTTCAATTTCTTACAACAAGCATTTCAGCCTCTCCTCCGTTCTTCAGAACCTCCAAGCTTACAACGTAGCCACC GGCAATGTTCTTCCCGACGATCAACCGCAACCCGACCTCACCACCGCCTCCGACCATAAAACTCCCTCCCTCAAACGCCGTCGGCCACCTCAATCCCGTG CCGGAGATGATGATGGCAATGATGCCCCCTTCTCTATGTCACACCGTGATTACATTGAGAAGAGAAGGAAAGAAGTTGCTTCATCTCGAAGTCACGATCG TGTTGAACTGACTGAAGATGTTTTGGGAAACCCTAATTCCGCTGTAGCATTGGTAGATTATGCAAGTGAAAGTGATGAAGATACCCCGTCAGAATGTCAA GAAACACATAATCAAAATTCTGGTCACACTAAAAAATTCGATGGAATCAAAAGCCGAAATGAGCAGCGTTTTCCTGTCTCTGGAGAACCTGTTTGTCTTA TATGCGGAAGATATGGCGAGTATATATGCAATGAGACAGATGATGATGTCTGTAGCATGGAGTGCAAACGTGAACTTTTGGAAATTCTTAAACTGGATGA GGGGTGCACCCACAACCAAGTTAGAGACTTCTCATCTGGAGTCAGTGATGCCTCTCCTGTTCCTGTGTTTGGTGACGATACCTGGGATTATAATCGGCAC CGCTGGTCAAAAAAGATATCTAGCCTTTCTACTTATGAGTGTTGGAAATGTCATAGACCTGGGCACATAGCTGAAGATTGTATAGTAAATAGTTGCAGTG AGATCACAGTGCCTAGTAATAGATCTAGTTCCATTCCGAAGGATCTTCTTGGACTGTATAGAAGATGCCATGAATTTGGTAAAGACTTATTGGCTGCAAA TTGTAATACATGTCACAGCTCTTCAAATTTGGCAACATGCCTTGATTGTAGCATTGTCTTTTGTGACAGGTGAGCTGAACTTTGTACTCTGGCTATGTTT CTTGTTAGAATTGTTACAAATGACTACAAAGAAGTGTCTAATAACTTGTGTTTCCTCTCCCTACCCTTCCATCTTCAAGTATCCTGACCTAGAAGGATCT TAGTATGGAAACTGGTAATATATGATCAAACATACATTTCATCATCATAAGAATGCTGGTAGTCATGTAAATGCAATAACAAATGATGGAGGGTATTTTC GTGTTTCATGTTTTGTTTCTTTTAATTCAATTTGTGTCCCTATTTCAAAACAATCTTGCTTTTTTGAGTTATATTATGAGCTTTTACTGGCATATCATAA GATTTATGTGTTTGTGGTTAGTGTTAAACTGTGATGTGTTGCATGCTCTTCTCCAAACAAATATCTGTGCCGAAGTTTTTCTACTTGATGCTACACTGGT TCATGAGCATTGTGATGTCAATGTATAAATTGCTGCAACAACATCTGACGATGTGGCTGGAACATGGATTTTAGTTGTTCATGATTTCTCTCTTATATAT TGTAAGTGTAGCACATAACATAGAGCAAGAAAACATTGTATGCATGCAAGGATACTACGGAAATTTATCACACTTGAGAAAATGCTTGTAAGTTTGAATT AAAAATTTAAGATAGGATGACTACGATACTGTAATTACTAGGCATTCTTCCATTATCTTTCTGACCTCCCAGAGGATATTTTCACTGTGGTTTTGTATTC CAGCTAATACTATGATTCCTATACTCCAGTGCAGGTCACTTGAATGAGCATATAAGAGCATACCCATCCCATCAAAAATATTACTCGCACAAACTGAAAC GTCTGGTTAGTTTTATCCTTTTACTTGACCATTGATTTTATTGAATAAGACTAAAAGCTCAATGGCTCACTTTATCTATATGAATATGAATGTATTTTAA CATGAGTAGCAAACATCTTTGGAGTTAAAAACTATAGCAGTCTTGACCATGAAAAGTTTTTCCTGCCAAATTAATGGAGAACCTGGTATGATAAGAATAT TCGTACAATTTTTTCCTGTTCAGATTCTTACTTCCAGCTTCTTATCTACAACTTTCATGTCTATTTTCACAAGTCTTTGAGGACACAGCCTTGTCTTGTC CTGTCGTGAATAGATATGTTATTATAGTTATTCACCAGCCGTGAATGTTCTCGCT BLAST |
Tissue | flowers |
Gene name | LI_gene_26220; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_252483
Blastp | Probable ATP-dependent RNA helicase DDX59 from Rattus with 63.83% of identity |
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Blastx | DEAD-box ATP-dependent RNA helicase 41 from Arabidopsis with 64.58% of identity |
Eggnog | purine NTP-dependent helicase activity(COG0513) |
Kegg | Link to kegg annotations (289402) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434392.1) |
Pfam | HIT zinc finger (PF04438.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |