| Id Trinity | FTRINITY_DN52528_c3_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_252472 |
| Sequence | ATGAACTATTTGGTTTGGTTCCATGTTTTGCTTGCTTTATAAAAATAAATCTCCTTTGTCTATTTCAACTACCATTTTAGTTAGTAAGCTAACATCTAGA CTTCATAATTTGAAACATAGTTGATATGCTTAATTGTATAATACAAACCAAACAAGTCATACTAAAAAACTTAGCTAAAAACTAAATTCGATCACTTTTA TCGATTATATTCGATCGCACTATTTTCGTGATTTAATTCGAAATCGCTTAACATATTGCGAAGGTTTATTGGTTTGTGTTGAAATTGGAAGGGAAATGGG CACTCGAACAAATTTCTACAAGAATCCTTCAATTTCTTACAACAAGCATTTCAGCCTCTCCTCCGTTCTTCAGAACCTCCAAGCTTACAACGTAGCCACC GGCAATGTTCTTCCCGACGATCAACCGCAACCCGACCTCACCACCGCCTCCGACCATAAAACTCCCTCCCTCAAACGCCGTCGGCCACCTCAATCCCGTG CCGGAGATGATGATGGCAATGATGCCCCCTTCTCTATGTCACACCGTGATTACATTGAGAAGAGAAGGAAAGAAGTTGCTTCATCTCGAAGTCACGATCG TGTTGAACTGACTGAAGATGTTTTGGGAAACCCTAATTCCGCTGTAGCATTGGTAGATTATGCAAGTGAAAGTGATGAAGATACCCCGTCAGAATGTCAA GAAACACATAATCAAAATTCTGGTCACACTAAAAAATTCGATGGAATCAAAAGCCGAAATGAGCAGCGTTTTCCTGTCTCTGGAGAACCTGTTTGTCTTA TATGCGGAAGATATGGCGAGTATATATGCAATGAGACAGATGATGATGTCTGTAGCATGGAGTGCAAACGTGAACTTTTGGAAATTCTTAAACTGGATGA GGGGTGCACCCACAACCAAGTTAGAGACTTCTCATCTGGAGTCAGTGATGCCTCTCCTGTTCCTGTGTTTGGTGACGATACCTGGGATTATAATCGGCAC CGCTGGTCAAAAAAGATATCTAGCCTTTCTACTTATGAGTGTTGGAAATGTCATAGACCTGGGCACATAGCTGAAGATTGTATAGTAAATAGTTGCAGTG AGATCACAGTGCCTAGTAATAGATCTAGTTCCATTCCGAAGGATCTTCTTGGACTGTATAGAAGATGCCATGAATTTGGTAAAGACTTATTGGCTGCAAA TTGTAATACATGTCACAGCTCTTCAAATTTGGCAACATGCCTTGATTGTAGCATTGTCTTTTGTGACAGGTGAGCTGAACTTTGTACTCTGGCTATGTTT CTTGTTAGAATTGTTACAAATGACTACAAAGAAGTGTCTAATAACTTGTGTTTCCTCTCCCTACCCTTCCATCTTCAAGTATCCTGACCTAGAAGGATCT TAGTATGGAAACTGGTAATATATGATCAAACATACATTTCATCATCATAAGAATGCTGGTAGTCATGTAAATGCAATAACAAATGATGGAGGGTATTTTC GTGTTTCATGTTTTGTTTCTTTTAATTCAATTTGTGTCCCTATTTCAAAACAATCTTGCTTTTTTGAGTTATATTATGAGCTTTTACTGGCATATCATAA GATTTATGTGTTTGTGGTTAGTGTTAAACTGTGATGTGTTGCATGCTCTTCTCCAAACAAATATCTGTGCCGAAGTTTTTCTACTTGATGCTACACTGGT TCATGAGCATTGTGATGTCAATGTATAAATTGCTGCAACAACATCTGACGATGTGGCTGGAACATGGATTTTAGTTGTTCATGATTTCTCTCTTATATAT TGTAAGTGTAGCACATAACATAGAGCAAGAAAACATTGTATGCATGCAAGGATACTACGGAAATTTATCACACTTGAGAAAATGCTTGTAAGTTTGAATT AAAAATTTAAGATAGGATGACTACGATACTGTAATTACTAGGCATTCTTCCATTATCTTTCTGACCTCCCAGAGGATATTTTCACTGTGGTTTTGTATTC CAGCTAATACTATGATTCCTATACTCCAGTGCAGGTCACTTGAATGAGCATATAAGAGCATACCCATCCCATCAAAAATATTACTCGCACAAACTGAAAC GTCTGGTAAAATGCTGCAAGTCAACATGCAAGGTTACTGACATCAAGGATCTTTTGGTTTGCCACTACTGCTTTGATAAAGCCTTTGAAAAGTTCTATGA CATGTATACCGCAACATGGAAAGGAGCTGGGCTTTCAATTATATGGGGCTCTATATGCTGTGAGGACCATTTTACCTGGCACAGGATGAATTGCTTGAAT GCAGGTGTGGAAGAAAGTGCATACATTGTAAAGAACAGTGGCCATAAAAGCAAACGCACACAACTAAGTGACTTCATTTTTTGATGGGTAAAAGTGAAAA CTTCCTGAATTTTGAACTATATTCTGAAATTGCTCAGTTCTGATCACTGGGTAATGGGATGGATATCATGCTCAGTTTCTCATTCTTGTTCAATGCTTGA TAGATAAAAAATTCAAGTAAGATCACACTGTCACTGCTAAACTGATGATTGTTGTGTTTGGATTAGCTGTGTAAGATGGGTTATTTCAGTACTTGATTAT ATTTTAATTGATTGTTGTTTAATCTGTTATGCAAATAATAGAACAATAGAGAAGATTTCACTTTTTGGTGCAAATTTTACAATACAAGAGGGGTCCTATT TATAGGAAATCCTGAATCTCAAAAATTAGGTAATAAATTCGAAGGATTACAATATTTCATAGCACCCCCTTGAATGGTTATTGTACAAAGAATATGGAAC ATTGAAACCTTATTAGGAAAAACCCTGGTGCATGAAAATGAGGACATCAGCTATTAATTAAGAACACAGCATGGACAATGGCAAAGGTAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_26220; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_252472
| Blastp | Probable ATP-dependent RNA helicase DDX59 from Rattus with 63.83% of identity |
|---|---|
| Blastx | DEAD-box ATP-dependent RNA helicase 41 from Arabidopsis with 64.58% of identity |
| Eggnog | purine NTP-dependent helicase activity(COG0513) |
| Kegg | Link to kegg annotations (289402) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434392.1) |
| Pfam | HIT zinc finger (PF04438.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |