| Id Trinity | FTRINITY_DN52533_c1_g1_i21 |
|---|---|
| Name Transcript | Ll_transcript_252615 |
| Sequence | CAAGGTTTCACTTTCTCTTCCTCCGATTTGCGCATAACGAAAACTGTTTTTCTTTTTTCACCTTTTTTATTACCGATTTTTTTGTCTCATTGTTGTTTCT TTCGCATTTCTCTCATTGTTGTTTCTTCCGCATTTGTCTCAGCAATAGCACCGTTGGCACAATTTTTTGGAAATCTAGGGTTACGTTATCGTGCATGAAT TGAAGGCTGATATTGGTTATCTTCTGCCGAGTTTAGTTGAAGATGGTTGAACGAAGGCAATTCAAGACGAGGTTATGTGTGCTCTACCAGAGAGGTCGCT GTAACCGAAATAACTGCTCCTTTGCACATGGGAACGTCGAGCTGCGACGATTCTCTGCCTCAAATAGTGATATATGCGGTTTGTTGGTGTCTTTGGATTA TTTGTAGTCCCTAGTTCCGTGTCTTTCTTTCTTTGTATCATGACTTGTACAGTAGCCTATATCTATTATTCATGTGATATAAGGCTGTTTAAATGGAGGG GGGTCTGTGTTCTGTTGTATATTTGTGATAACGTGCTGAACTTGAATGGGAAAATTCACTAATGATGAGGAGAAAAAGTGCTGTATGATGATAACATACT GAAAGAGAAAAATACGAGGAAATATATTATTTACAGAAGATGTATCTTTACCGTCATGGTATTTGCTGTAAACCCCTTATTCACATCATGGCTTGTTTCA TGAGCACTCTGTTATTCCATTTGTTTAGCTGGAATCGATGTCCTTAAAAAACTGAGGATCAGAATACTTTTCTAATAGACTGGTCCATATGTGCAACTGG TTCTGTGTAAGATCCCCAAGCTTAGATGTGCAATAACAAATAGCATATGAGGTTAATGTCAGATTACTTTATTCAATGATAGGACTTCTGGTCACATTAT CGTGTTGAGACTGATACATTTCCAGCAGTATGGGTATTCGATTTTAGTTGAAAGATTCTTCAGAATGGATTCTGCTGTTTGGTATTGTTGAAAGCATTAT TTTTTCATGGCAACCATTTTATGCTTCATTCCATAAATCTATGGTACTGCAGTGTTTCCTGAAGGATCATGATTATACTTATGTGGCTATGCCAGCTGGC ATCATATTTTGATCTGGAGCAAGTTCCGTGAATTTCTCAATCATTTAATGTACAAATGTACTGCTTCAGTGTATGGACCTTATTTTATTAATTGACTGAT ACTTCTGGATAAGATGTGGCTACTTCGACAAAGGCAACATGGAGTTGTTAGTGGAGAATATGTCAGGAGTAACCCAAATCTGATAGCATGTGGATGGATT TTTATTTCTTATGCGTCTTGGATATATCTCTACATTTGAGATTGTATTTTATATCTTACTGCTCAACAATATGAGGATGTGAACTGTTCTTAATCTATTG CTACCTTGATTACACGATAAAAGCTGTGGATTTTATATATGTCATAATATGAGGGCACTAGTTTCTATCGTCCTTTTGGTCTAACACGGGGGGCACTATT ACTATTCATTAATATGTTTCTCTTGTTATTCCGGTTAATGGGAGGAGAGAGTATCCAGGTAATGACTTGAGGGATAAACTTGACAGAAGGTATTTATCAC CTCCTCGAAGGTACTCACCACCTAGAGATGGAAGAGGACCCCAGGCCATTCATGGTTACAGTCCCTCAAGGTCCTCAGAGAAAAAAAGTGACAGAAGGCA TATAAGGAAGCAAGGAACTAGCAGCCAACGTGATAATCTTGAAAGTTTAAAATTCTCGGATAGAATTCCAGATCAAGTTAAAGAAGGAAAATTGTTTTCC TCTGGTTCTAGAAATACACTTGATGAACAGCTGAAGAAAGTAGAGTCAGATATCAACACTCTTCAGAACCGAAAATTCCAACTAGAGGTCTACCTGGATG AGAGTGTTCAAGAAGTGGATAGCCTTAATTCTACAATTCAGGAACTTGATGCTCAATTATGCAAAGAGAAGGAAGAGTGTAGAAGAATTACTTCAAGAAT AAGGCAGTTTATTAGAGTGCACCATCATAATTCCCAGTTACAAGATGAACTGCAGAGATCACAGGTCCGACTTCAAAGGTTTGGAGATGAACTTGTCTCT GACATTTCTAGAATTGGTGCCAGTGAAGAAGATTTAAGCATTGATATTGTTAGCAATGGTGAGAATCCGGCTCTTCCTCTGGCTATCAAACATAATGTGG ATCAGAATGATGCATCTCCCCACAGGAAAAGGCAGCATGTTAAACAAGATGCTGTGGAAGAGTTGAAACAAGATAGATCAAAAGTTGGGAATCTGGTTGG AACATCAAGAACCAGGAAGCGATCTCGTTGGAATTTGCCTGCTCAGTTGAATGACAAGGATGAAGAGAACATTGATGTCCCCCTAAACACTGGAACTGAA GTTACTAGGACCATCAATCATGAAGGGAAGCACAAAAGAGGAATATGTAATTCTTCTAACAACCTAATTTCAGAAAAGTTTAAGGAATCTAGGATTGAAG TGCCACCAACCAGCATGGCAGCTCATGTGATTGATGAGGAAATTGAGATTGAACTTAATGACAGAACTGATATAAGTGAAACTCTACAAACCAAAAATGA GAATGGAGTGGCACATGAGGCAAAGAGCCTACTGCTTATGCTTCATCCACCTTTGATTCCTCGTAGTAATTATTCGCGGGTCAGTTCATCCTCTTGGGTA CATTTTTATCTTCCTCTTGGGTACATTTTTATTTCGCAGCATGCTATACCATTTACTTATGTTCTACAGAGTAGATACCGCACTTTCATTTTGTCAGTTG CTGTTTCATACTTAGATTTATTTTTTCCATAAATATAATTACTGCCTTGAAAATTAGGCATTTTGTAGGCATATGTGAAGCAATTTAAATTGTGTGCAGT ATGAAGGTGATGACGAGAATGTGGATGTGGATGGTCTTGACGAAGAGGATGCAGGGGCACATGTGGATATAGTCTAATTAATAGTATGGAGTAGCCATTT CTACACTATATTTTCCTTTAGTGACTTAAAGTAGTTGTTGGAAATGTTAATATCTTGAACAAAAGTATTTACAAATAGGATAGAATGCAAGATTGTCAAA GAAAAAGTATCAAATATTTAATTTTGCTTGCATGAATATATACACATTTTACAGCGGTGCACATCTGCCGTTAGCCTGTTACACACTTAGTGTCACTCCA TGTGTCATGGGCATGTGTACAGTGGTGGATAAATTGTCCTAGCGTGCATAAGAATGCATGTCATTGCTGTAGTGGTGGTGCTTAATCTTAAATGTCTATA TACTATAAGGCTCGTTAATTTCCTCTACGCTATCGTTGTTTTTTGTCCTTCTCATCCAATAATTGGTCAAATTAAATCCGTAGTGCACCTTTCCATTAAA GAAATGTAGCATCGGACAAATAATTGTTTTTGGTCAAGCTGTTTTATGTTAAACTCCTCTTATCTAACAAAGAGAGTTGCTGATACAATTCTATTACTGT ATTCCATTTTTGATAGCAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_26295; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_252615
| Blastp | - |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 13 from Oryza sativa with 31.59% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453760.1) |
| Pfam | - |
| Rfam | - |
| GO | - |