| Id Trinity | FTRINITY_DN52533_c1_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_252590 |
| Sequence | CAAGGTTTCACTTTCTCTTCCTCCGATTTGCGCATAACGAAAACTGTTTTTCTTTTTTCACCTTTTTTATTACCGATTTTTTTGTCTCATTGTTGTTTCT TTCGCATTTCTCTCATTGTTGTTTCTTCCGCATTTGTCTCAGCAATAGCACCGTTGGCACAATTTTTTGGAAATCTAGGGTTACGTTATCGTGCATGAAT TGAAGGCTGATATTGGTTATCTTCTGCCGAGTTTAGTTGAAGATGGTTGAACGAAGGCAATTCAAGACGAGGTTATGTGTGCTCTACCAGAGAGGTCGCT GTAACCGAAATAACTGCTCCTTTGCACATGGGAACGTCGAGCTGCGACGATTCTCTGCCTCAAATAGTGGTAAAATTTTCAGCTTTGAATTGTTTGCTTG AGTCTATATATTGCGGGTTGAGGTGAATGTGATGTTGTTAATTGAGGGATGATTATTGATGGATCAATTGTTACTTAGATTTTGGTTGACAGTGCATTAG ACAAGTGTGTAGTTGATTAAGTTAAGTGCTTTATTTGGATAGTTGTGTTTTTGGTTAAAATTCCTTCAATGAAGGATGAATCTTCATTGTAGTTACTGTT AAGTTGTCCAGCTGTTTTATTTTAGTAGAACTAGCAGATTATCACCGAGGAAACCACATAAAAGAGAAATAAGTAATGGCCGAATTGGTACATCACTCGC TGGTTAATATGCTACTATTTTAATTACTCTGAGTTGTAATGTAATACTAATATTGGTATTGCATCTGCTTTGTCCGCCTGCTACTCTTGTTTTTCCTCCT AAGAAACTTCCTCCAATAACTCCATCAGAGCAGACCATCTAATATTTATTTTCCACATCATTTCAGCTTCATCAAATTTTCTTCCTTTTGTTTTCATATT CTTTTTAGAGGGTGAGCCTCAGCGCAGTTAGGTTGCCTCTTAGTGACCAAGAGGCCATAGGTTCAAATCCTGAAAATATCCTCTTCCCTTGCAGGGGTAA GCCTGCGTGCATCTGTCCTCCCAGACCCTATTAGGTGGGTTTCTCATGCATTGGGCCGCCCTTTTTCTCACATTCTTTTTGCTGTTATAATTTATTGTCT ATATCATTTCATGCAACTTTATATCATTACCATAGAGCCTTTTTTCTAATACTTCCTCCCTATGCCAATGTCAAGCTTTATTTCTTTTATGGAGTGCTGA CTTCAAAAGATTGTTCCAGAATGAAAATTATACACAACTTTGAAGTGCTAGCTGTTGCTTCTTGCAGATATATGCGGTTTGTTGGTGTCTTTGGATTATT TGTAGTCCCTAGTTCCGTGTCTTTCTTTCTTTGTATCATGACTTGTACAGTAGCCTATATCTATTATTCATGTGATATAAGGCTGTTTAAATGGAGGGGG GTCTGTGTTCTGTTGTATATTTGTGATAACGTGCTGAACTTGAATGGGAAAATTCACTAATGATGAGGAGAAAAAGTGCTGTATGATGATAACATACTGA AAGAGAAAAATACGAGGAAATATATTATTTACAGAAGATGTATCTTTACCGTCATGGTATTTGCTGTAAACCCCTTATTCACATCATGGCTTGTTTCATG AGCACTCTGTTATTCCATTTGTTTAGCTGGAATCGATGTCCTTAAAAAACTGAGGATCAGAATACTTTTCTAATAGACTGGTCCATATGTGCAACTGGTT CTGTGTAAGATCCCCAAGCTTAGATGTGCAATAACAAATAGCATATGAGGTTAATGTCAGATTACTTTATTCAATGATAGGACTTCTGGTCACATTATCG TGTTGAGACTGATACATTTCCAGCAGTATGGGTATTCGATTTTAGTTGAAAGATTCTTCAGAATGGATTCTGCTGTTTGGTATTGTTGAAAGCATTATTT TTTCATGGCAACCATTTTATGCTTCATTCCATAAATCTATGGTACTGCAGTGTTTCCTGAAGGATCATGATTATACTTATGTGGCTATGCCAGCTGGCAT CATATTTTGATCTGGAGCAAGTTCCGTGAATTTCTCAATCATTTAATGTACAAATGTACTGCTTCAGTGTATGGACCTTATTTTATTAATTGACTGATAC TTCTGGATAAGATGTGGCTACTTCGACAAAGGCAACATGGAGTTGTTAGTGGAGAATATGTCAGGAGTAACCCAAATCTGATAGCATGTGGATGGATTTT TATTTCTTATGCGTCTTGGATATATCTCTACATTTGAGATTGTATTTTATATCTTACTGCTCAACAATATGAGGATGTGAACTGTTCTTAATCTATTGCT ACCTTGATTACACGATAAAAGCTGTGGATTTTATATATGTCATAATATGAGGGCACTAGTTTCTATCGTCCTTTTGGTCTAACACGGGGGGCACTATTAC TATTCATTAATATGTTTCTCTTGTTATTCCGGTTAATGGGAGGAGAGAGTATCCAGGTAATGACTTGAGGGATAAACTTGACAGAAGGTATTTATCACCT CCTCGAAGGTACTCACCACCTAGAGATGGAAGAGGACCCCAGGCCATTCATGGTTACAGTCCCTCAAGGTCCTCAGAGAAAAAAAGTGACAGAAGGCATA TAAGGAAGCAAGGAACTAGCAGCCAACGTGATAATCTTGAAAGTTTAAAATTCTCGGATAGAATTCCAGATCAAGTTAAAGAAGGAAAATTGTTTTCCTC TGGTTCTAGAAATACACTTGATGAACAGCTGAAGAAAGTAGAGTCAGATATCAACACTCTTCAGAACCGAAAATTCCAACTAGAGGTCTACCTGGATGAG AGTGTTCAAGAAGTGGATAGCCTTAATTCTACAATTCAGGAACTTGATGCTCAATTATGCAAAGAGAAGGAAGAGTGTAGAAGAATTACTTCAAGAATAA GGCAGTTTATTAGAGTGCACCATCATAATTCCCAGTTACAAGATGAACTGCAGAGATCACAGGTCCGACTTCAAAGGTTTGGAGATGAACTTGTCTCTGA CATTTCTAGAATTGGTGCCAGTGAAGAAGATTTAAGCATTGATATTGTTAGCAATGGTGAGAATCCGGCTCTTCCTCTGGCTATCAAACATAATGTGGAT CAGAATGATGCATCTCCCCACAGGAAAAGGCAGCATGTTAAACAAGATGCTGTGGAAGAGTTGAAACAAGATAGATCAAAAGTTGGGAATCTGGTTGGAA CATCAAGAACCAGGAAGCGATCTCGTTGGAATTTGCCTGCTCAGTTGAATGACAAGGATGAAGAGAACATTGATGTCCCCCTAAACACTGGAACTGAAGT TACTAGGACCATCAATCATGAAGGGAAGCACAAAAGAGGAATATTTTAAGGAATCTAGGATTGAAGTGCCACCAACCAGCATGGCAGCTCATGTGATTGA TGAGGAAATTGAGATTGAACTTAATGACAGAACTGATATAAGTGAAACTCTACAAACCAAAAATGAGAATGGAGTGGCACATGAGGCAAAGAGCCTACTG CTTATGCTTCATCCACCTTTGATTCCTCGTAGTAATTATTCGCGGTATGAAGGTGATGACGAGAATGTGGATGTGGATGGTCTTGACGAAGAGGATGCAG GGGCACATGTGGATATAGTCTAATTAATAGTATGGAGTAGCCATTTCTACACTATATTTTCCTTTAGTGACTTAAAGTAGTTGTTGGAAATGTTAATATC TTGAACAAAAGTATTTACAAATAGGATAGAATGCAAGATTGTCAAAGAAAAAGTATCAAATATTTAATTTTGCTTGCATGAATATATACACATTTTACAG CGGTGCACATCTGCCGTTAGCCTGTTACACACTTAGTGTCACTCCATGTGTCATGGGCATGTGTACAGTGGTGGATAAATTGTCCTAGCGTGCATAAGAA TGCATGTCATTGCTGTAGTGGTGGTGCTTAATCTTAAATGTCTATATACTATAAGGCTCGTTAATTTCCTCTACGCTATCGTTGTTTTTTGTCCTTCTCA TCCAATAATTGGTCAAATTAAATCCGTAGTGCACCTTTCCATTAAAGAAATGTAGCATCGGACAAATAATTGTTTTTGGTCAAGCTGTTTTATGTTAAAC TCCTCTTATCTAACAAAGAGAGTTGCTGATACAATTCTATTACTGTATTCCATTTTTGATAGCAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_26295; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_252590
| Blastp | Zinc finger CCCH domain-containing protein 13 from Oryza sativa with 43.06% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 40 from Arabidopsis with 35.51% of identity |
| Eggnog | zinc finger CCCH domain-containing protein(ENOG4112ATJ) |
| Kegg | Link to kegg annotations (4328385) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453762.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |