Ll_transcript_252000

• Id Trinity: FTRINITY_DN52550_c0_g1_i4
• Name Transcript: Ll_transcript_252000
• Sequence: CGTAACTCACAATCAGAAACAAATCACTTTCACCACACAGATAAAACGTCCACATCACCATATACCGTACGCGTCGTATGGTAACAAAATACACCCCAAT CCATACAATCCCACCCTCTTCCATTCTTCATAGTTCAGACACAGTAATAGCTATCTCTATATTCTCTCTCATATTCATCTCCATTTGCTTCAAATCACAG GTTTCTCGCTTTTTCACCATTCATTTCAACGTTCATCTCTTTCCTCATTCATTCATCATTCAATCTACAACCACAACTATCTAATCGGATCCAACATAAC CGAACGTGGATCTAGGAATAGAACTAAGCTTCGGTGATTCACTTTTCTATTTTTAGAAAGTTCTGTTAACTATAACGCTAACCCTAACGGGTTTCTACTT TTAGAAGTTCCATTCACCGAATCAGCTTCAGTTGTTGAGGATGGCTCCGAGTACGATTCGAAAGGCGATTGGAGCGGTGAAGGACCAAACGAGTATCGGA ATTGCGAAGGTGGCGAGTAATTTGGCACCGGAGTTGGAGGTTGCGGTGGTGAAGGCGACTAGTCACGACGATGACCCGGCGAGTGAGAAGTACGTACGGG AGATATTGAATTTGATGTGTTACTCTCGTGGCTATGTTCATGCGTGCGTCTCCGCGGTGTCGAAGCGATTGGCGAAGACGCGCGATTGGATTGTGGCTTT GAAGGCTCTAGTGCTTGTTCACAGGTTGATGAATGAAGGACCGGTTCTGTTTCAGGAGGAGATTTTGTATGCTACTAGAAGAGGAACAAGGCTTTTGAAT ATGTCTGATTTTAGAGACGAGGCTCATTCGAGTTCATGGGATCATTCTGCTTTTGTTAGAACTTATGCTATGTATCTGGATCAACGACTTGAGTTGATGT TGTTTGATAGGAAAGGTGGCAGTGTCGGTGGTGGTTCGGGTTCGGATTCTGCCGCTGATGATAGGTTTGCGGGGAGAGACAATTTTAGATCTCCGCCGCC ACGGGCGACTGAGTATGAGTATAGAGGTGAATTCAGAGAAGAGAGTGGTGGGTATGGGAATGGGATGAGGAGAACGAGGTCGTTTGGTGATACGAGTGAG ACTGTTGGAAATGAAGATAAGAGGATTGTGAGTGTAACTCCTTTGAGGGATATGAAACCGGAGAGGATTTTCGGGAAAATGGGTCATTTACAGAGGCTTT TGGATCGGTTCTTGGCTTGTAGGCCAACTGGGTTGGCGAAAAACAGTAGGATGATTTTGATTGCTTTGTATCCTGTTGTGAAGGAGAGCTTTCAGTTGTA TGGGGATATATGTGAGGTTCTGGCTGTGTTGCTTGACAAATTCTTTGATATGGAGTACCCTGATTGTGTTAAGGCATTTGATGCTTATGCCAGTTCGGCT AAGCAGATTGATGAGCTCGTTATGTTCTTCAATTGGTGTAAGGAAACCGGTGTAGCAAGGTCTTCGGAGTACCCAGAAGTTCAGAGGATTACTAGTAAGT TGCTGGAGACGCTGGAGGAGTTTGTGAGGGATAGGGCCAAGAAGCCAAAAAGTCCAGAAAGGAAACAGCTGGAAGCACCGCCGGTGGTAAAAGACGAGGA GGAACCCGTCCCAGATATGAATGAAATCAAGGCACTGCCTCCACCCGAGAATTACACCCAACCCCCTCCATCTGAACCGGAGCCCAAGCCTGAGCCCAAG CCACAATTTACCGAGGACTTGGTGAATATAAGAGATGATGCAGACACTGCAGATGATCAGGGCAATAAATTCGCTTTGGCGCTCTTTGCTGGTGGAGCAG CCAACAATGGAAATGGATCATGGGAAGCTTTCCCGTCAGATGGACAGCCGGAAGTGACTTCAGCATGGCAAACACCGGCCGCAGAATCTGGGAAGGCTGA TTGGGAATTGGCATTGGTAGAAACTGCTAGCAATTTATCAAAGCAGAAGGCAACTCTAGGTGGTGGATTTGATCCCTTATTGCTGACTGGAATGTATGAT CAAGGAATGGTGAGGCAGCATGCGAGCTCTGCTCAACTGAGTGGAGGGAGTGCTAGCAGTGTCGCATTGCCCGGACCTGGAAAGCCCACAACGCCTGTTT TAGCTCTCCCAGCCCCAGATGGAAGTGTGCAACCTGTGAATCAGGATCCATTCGCAGCATCATTAAGCATTCCACCACCCTCATATGTGCAAATGTCTGA TATGGAAAAGAAACAGCAGTTACTAGTGCAGGAGCAGCAGCTATGGCAACATTATGCAAGGGAGGGGATGCAAGGACAATCTAGCTTGGCCAAACTCGGG GGCCCTGGATACTATGCCGGAGGTCCCATGCCAGCGATGCCTTATGGAATGCCCCCAGTCAATGGAATGGGACCACCCGCCGGGTACTACTATTCTCCAT CATGATGATTCTCTGTAGATTACTTTGTTCATTTCATTTTTTGTTTACTATGACAGTGTTTTCCTTTGTTTTTAATGATGGTATATTATTCTTGAGATCT GCACGTTAGTACAATGGGGGTGCTAAGGAGACTGACTGAGTTGAAGAGACCAAATTCTTGTTGGTTTTTTATGTTGGGAAGAGGAGGGTGTGACTCAATT GTGATGTTTCTGTGTCTTGTAATTCTAGCATTTTGTTCTTGATTTTTGTACTTAAGTGATTCTTGCTCCTCAAAAAACAACCGCATAACTAATGTAAATT TTATTAAATCTTGCTGCTGAATCTTGATTGGATTATGCCAAATGATATTTCCATATTGTCTTGTGGGAACAAATGTGGCTGCTTGTTAAACTCTAGCACA ATAATCAGGGAGTGAGTGGTTCAACATGGGTTGGAGTTAGATATGTTAGTCCCATGATGGGTTTGACTTGTAAGTAACCGATTTGGTAATTTTTAAGTTT TCTATTACCATTGTTAACTTTACCGGATCATTAACCTTTTCCTCAGTCCTTTATTAGATGTGAAGTAATGAACATGGATCCTCTGTCCCAAGAGGACTCT GTCTCCCTGTCCCTTGTTGAATGAAATAGCAG
• Tissue: flowers
• Gene name: LI_gene_26410;
• Additional information: details;

Expression of Ll_transcript_252000

FPKM

• FPAB: 27.6
• FPNAB: 31.4
• LF1: 22.3
• LF2: 25
• LF3: 16.7
• LF4: 16
• UF1: 19.6
• UF2: 21.5
• UF3: 15.1
• UF4: 14.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_252000

• Blastp: Putative clathrin assembly protein At2g25430 from Arabidopsis with 74.36% of identity
• Blastx: Putative clathrin assembly protein At2g25430 from Arabidopsis with 72.35% of identity
• Eggnog: Clathrin assembly protein(ENOG410XQ90)
• Kegg: Link to kegg annotations (AT2G25430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417055.1)
• Pfam: ANTH domain (PF07651.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;