Id Trinity | FTRINITY_DN52557_c3_g1_i1 |
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Name Transcript | Ll_transcript_253061 |
Sequence | AAACAATTTAAATCAAAGGCGTGAAGCACCAAATAAAGGAAGTAATAGAAGCAAACAAGTCTAGTTGACCACCAACTTACCCCATTCTCAAACAATTACA AAATGTCAACCTCCCTCGCCGCCGCCGCCGGATTCAGATCACTTGCCGTTGCCGTTACTGGTGGCTCCGGCACCGGCAGTGGTAGCCGTCGAGCCGTAGA TTGGGCGGTCGAGAATCTCTTGCCTCAAGCTGATAGGTTCATCTTAGTCCACGTCATCCCCGCAATCACTTCAATTCCAACACCAAGTGGAGAGTCTATT CCTATTTCGGAAGCAGATTCTGATGTGCTTGCAACTTACATGCAGGATGTGGAACAAAGATCTGAAGAAATCTTTGTTCCATTCAAGAAACTCTGCAAAA TAAACACCGTGGAAACCTTGCTGCTAGAAGATGACAATCCTGCTAATGCACTTCTTAGCTTTATCTCGGAGTCTGACATCCAAATATTAGTGATGGGCTC TTACTCCTCAAATTTTATAACAAGGAAGCTAAAAGGACCAGGGATACCAACAACTGTTCTAAGATGTGCACCTGACAGCTGTGATGTATATCTTGTAGCT CGAGATAGAATTATATCGAAGCTATCCGATTCTTTAGCTTCAGCTTCTTATGAGACTAGTTCAAGGTACTCCATGTCTACTCAAGTGAGTAAAGGAGAAA ATGGTTCTGGCATTGGTAGCGAAGCATCTAGATTTAATTCATCCTCAGCAGAACCTAAAAGTCCAAAAAATTTCAAGTTTTTGTCAATATCAGCTCGTAG TTACATCGGTCTTCAGATATCTAGTCACAGGAGTTCTTTTAAAAATCATACTAGAAATGAAGAAAATCCAGAAAGTTGTGGTGATGATTTTGAAACTTTT AGCCTCTACTCATTTGATTCCGTAGCTTCTGTACAACGTGAACAGGTAGTTTCTTTTCTTTCTTTCCTTTTTAGGAACAGCAGTGGTATTAATATGATTC GTACTTATGCAGTTAGCCGTACAAGAAGAAGTGGAACGTCTACAGCTGGAGTTGCAGAATACTGTTGCAATGTACAAACAAGCATGTGAAGAGCTGGTTC ATGCTCAAAGCAAGGCCCTTTTACTCTCTTCTGAATCTCTTGAAGAAGCTAAAAGAGTAAATGATTCCCTGAAAAGAGAGGAGACTTTGAGAAAGATTGC TGCTGAAGAGAATACAAAGTATTTAAAAGTCATGAAGGAGCTTCAGGAGGCAAAAGAAATGTTTGCCAAAGAGTCATATGAAAGACAGTTGGCTGAACTA AATGTTGCAAGAGAGTCCATAGAAAAGCGGAGGATAGTGGATACATTGCTCTCAAATGATAGGAGATACAGAAAGTACACTATAGATGAAATCCAGATAG CGACAAACTTCTTCTCCGAGGACTTGATAATTGGGGAAGGAGGGTACGGGAAAGTTTATAAGTGCACTCTGGATCACACACCAGTAGCTGTAAAGGTTCT GCACCACGATACAATGAACAAGAAAGAAGAATTTCTGATAGAGGTTGAGATTCTTAGTCAGCTACACCACCCAAATATGGTTTTGTTACTTGGAGGATGT CCTGAGAAGGGTTGTCTTGTTTATGAATACATGGAAAATGGTAGTCTTGAAGATTATCTTTTCGGTAAGGGAAAAGCACCACTGCCTTGGTATGTTAGAT TCCATATAGCTTTTGAAATGGCTTGTGGGCTCTCATTCTTGCATAATGCCAAGCCAGAGCCTATTGTTCATCGAGATATGAAACCTGGCAATATCTTGTT AGACAAAAATTATGTGAGCAAAATTTCAGATGTAGGGCTGGCTAAACTCCTTGAAGATGTTGTGCCTGACAATGTCACAGAGTACAGAGAATCTGTGCTT GCTGGAACTATACACTACATGGATCCAGAGTATCAGAGGACCGGCACCGTCCGACCAAAATCAGATGTATATGCTTTTGGAGTCATAACTCTCCAATTGT TAACTGGTCGCCATGCACGAGGAGTTATTATGACTGTTGAAGATGCAATTATAAAAGGTTCCTTCCATGATATTTTAGATAGATCAGCTGGAGATTGGCC ACTGGAAGAGGCAGCAGAGTTGGCCCAAATCGCCCTTAGATGCGTTGAACTTAGATGCAGAGATAGACCAGAACTTGACACTGAAGTTCTTCCCGTGCTC AAAAGACTTTCTGATGTGACAAATGCTAGTGCAAGAGTCGGAGTAAATAGCAGAGGCACACCAAGCCAGTATTATTGTCCAATCCTTCAGGAAATAATGG ATGATCCACATATTGCTGCGGACGGTTTTACTTATGAATACAGAGCAATCAAGGCATGGCTCAGCAAACACGATGTGTCACCCGTGACAAAGCGCAAACT CAAGCATTCTATGTTGACTCCAAACCAAACTTTACGTTCTGCCATTCAGGAGTGGAAATCAGGAGTGACTTCATTTGATTAGCAAGCATTTGAAAGATTA TTACATTGCTGGAAACTCAAACAACCTTTACACTTTGCCCATTGAGAATTCCCCACTGCTCATTTTAGCTTGCTTTTACATGCACCATTAAAACTGTCAG TAGTTTGATTTGCAAATAGGTTTGCAAAACAATTTTGGAAATTTAAGTAAAGCATCTCTTACATAGAATATATTATAAAAAGAGAAAAAAGTTGTATATA TACTTTGTTAAGCCCTTGTTTGAATTGTATTTAAGTTCAGTTATAGACAGACATGTGTTCAGTTATAGTGTAGATGAAATATTAGCAGTTAAGATATTAA TGTACAGTGAGACTTTGTTCCATTATGTATAGATACGTGTACAAGTCTAATAATCATAAACTTTTATATGCTTCATGTAATGAAATTAACTACAGTAGTA CAGTACTACTGGGGAAGTTTTGTATTTTATTGTGACATTTAAAGC BLAST |
Tissue | flowers |
Gene name | LI_gene_26472; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_253061
Blastp | U-box domain-containing protein 34 from Arabidopsis with 61.72% of identity |
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Blastx | U-box domain-containing protein 34 from Arabidopsis with 61.57% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT2G19410) |
CantataDB | Link to cantataDB annotations (CNT0001800) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019455036.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |