Id Trinity | FTRINITY_DN52596_c2_g1_i1 |
---|---|
Name Transcript | Ll_transcript_251259 |
Sequence | ATACACAGCACCAGTAATGTATAGGCGTGCATCTCATACTCACTATCTTAGTCTCCACACTGATGAGCATCCCGCAACTCCTCCCAACCTTTAAACTCCC AGTTCAACTCGGAAACCTAACAACACCATGGAACTGCAGATTACGAGAGCTCTCAAAGCAACGCCAATACCCACAAGCTCTCACTCTCTACATTCACATG CTTCGTTCTTCTTTCTCTCCCAACACTTTCACTTTCCCTTTCCTTCTCAAATCATGTGCCCATCTCTTCTTACCCTTCACTGGGTCCCAACTCCATGCCC ATGTCATTCGAACCGGGACCCAACCTGACCCATATATCCGTACTTCACTTGTTTCTATGTACTCTAAATTCTCTTTACTCAACAATGCCCGCAAGGTGTT CGATGAATTTCCTTACTGGCAAAACATCACTATTTGTTATAATGCTATGATTTCTGGGTATACGTTTAACTCTAAGGTTAGAGAGGGGTTTGTTTTGTTT CATCGAATGAGGGAGGAAGGGGTGGAGGTTAATTCGGTTACGATGTTGGGTTTGGTTTCTGGGTGTACGGTTCCTGAGGATTTGACCATTGGTGTGTGTC TTCATGGGTTTGGTGTTAAGTTTGGATTCTATGGTGATTTGTCTGTGGTGAATTCTTTGCTCACTATGTATGTTAAATGTGGCGAGGTTGAACTAGCGCG GAAGTTGTTTGATGGAATGGGTGAGAGAGATTTGATTACTTGGAATGCTATGATTTCTGGGTACGCGCAAAATGGGCATGCTAGACAAGTTTTGGAACTT TACCGTGAGATGAAGCTGGCAAAGATGAGACCTGACCCCGTGACGCTTCTTGGGGTTGTTTCGTCTTGTGCTAATCTTGGTGCTCAGAGCATTGGTCGTG AGGTGGAACGGCAGATACATTGCTGTGGGTTTAGTTCGAATACATTTTTAACGAATGCCTTGATCAATATGTATGCTAGATGTGGTAATTTGGTACGCGC TCATGCAATTTTCGATTGTATGGCTGAGAAAAATGTTATTTCATGGACGGCCATAATTGGTGGTTATGGAATCCATGGACATGCAGAAATTGCAGTCGGT CTTTTTGACGAGATGGTTGAGTCTGGCATCAGACCGGATAAAACGGTGTTTGTGACTGTTCTTTCTGCCTGCAGCCATGCAGGATTGACTGATAAGGGCT TGGAATATTTTGATGCAATGGAGGTGAAGTATGGTTTGAAGCCAGGTCCGGAGCACTACTCTTGCTTGGTGGACCTGTTAGGCCGGGCAGGTAGGTTGAA GGAAGCTATGGATCTCATTAAGTCAATGAAGGTAAAACCTGATGGTGCTGTTTGGGGAGCCCTTTTGAGTGCATGCAAAATTCATAAGAATGTAGAGCTG GCAGAGTTGGCCTTTGAACATGTCATTAAGCTTGAACCCACAAATATAGGTTACTATGTTTTATTATCAAACATATACTCTGATGCTGAAAACTTGGAGG GGGTTTTAAAAGTCCGAGTCATGATGCGGGAACGAAAACTTCGAAAGGATCCAGGATGTAGTTATGTTGAATATAAAGGAAAAGTGCATCTATTTTACTG TGGGGATAGAAGCCATCTTCAAACGGAGGAAATATATAGAATGTTAGATAAGTTGGAAAGTCTTGTAAAGGAGATTCACGCACCAGCTGAGAAATATCAA GGAAGGAGTGAAGGAGTCTTAAATACCGGGGTGCATAGTGAAAAATTGGCAATTGCATTTGGCCTCTTGAACACTACGTCTGGAACAGAGATTACTGTGA TGAAAAACCTGAGAATCTGTGGAGATT BLAST |
Tissue | flowers |
Gene name | LI_gene_26735; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_251259
Blastp | Putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial from Arabidopsis with 60.46% of identity |
---|---|
Blastx | Putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial from Arabidopsis with 60.46% of identity |
Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
Kegg | Link to kegg annotations (AT3G11460) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019426729.1) |
Pfam | PPR repeat family (PF13041.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |