Id Trinity | FTRINITY_DN52613_c1_g1_i1 |
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Name Transcript | Ll_transcript_207879 |
Sequence | AACTGGTTGAAAAAGCAAAACAAAAATGCCCAATTGAAACAACAGTTCCCTTTGTTCCGTCCGCTACATGATGACTGAACAATCCAAAATCTATTCTTTA AGTTTCTCACTCACCCATGTTTGACACTCAGCATGGTTCTCATCAAATCCACTCAAACAAAATATGTCTCTACCAAGCTCCCATTGTTTTTCAGAACCCA CTTCACCAATTCACCCAACAAGCCACACCTTCCACTTCCACCACTCCATTCAAAACCACACTCACAGCTCCAAAACAATGGAGGGTTCTCCTTCCAAGAC TGTGTTCCCCTCTTGCAACACCTCAGGGATCACAAGGACATAAACTGTGGCAGAACCCTTCATTCTCTCTTTATCAAGAGTGCCTTAGACAAAGACGTCT TTGTACAGAACAATATGGTCAGGTTTTATGGTGATATTGGAGAACTCGAGAATGCACATAACGTGTTTGATAAAATTCCTGAGCCGAGTTTGATTTGTTG GACCAGCTTGGTCTCCTGCTATGTCCATGTGGGGCACCATGAAGTGGGTCTAAGGTTGTTTTGTGGACTTTGTCGATCTGGGATGCACCCCAACGATTTT GGTTTCTCTGTGGCACTTAAGGCTTGTAGGGTGATGCGTGATCATCTCATGGGTAGGCTCATTCATGGGTTGATAGTCAAAACTGGATTTGATTCACATG ATTTTTGTGGTGCTTCAATTCTTCACATGTATGCTGAATGTGGAGATATTGAGAATGCGAGGAAGTTCTTTGATGAGGTTTGTGTGGGAGAAAGGTGTGA AGCATTGTGGAATACTTTGCTGAATGCATATGTGCAAATGTCTGATGTGGAGGGAGCTATGAAGTTGTTTCGCGAGATGGGGCACTCTGTTGTGTCACCG AATCGCTTTACTTACACAATCCTTGCTAAACTCTGTGTTGACGTGTTGGATTTTGAACTTGGAAGGTCTGTTCATGGCCAGACTATTAAGATTGGAATTG AAAATGATGTTGTGGTAGGTGGGGCTCTTGTTGACTCTTATGCGAAACTGGGATTCTTGGAGGATGCTTGTAAAGTGTTTCATATTCTTGAAGAGAAGGA CAATGTGGCATTATGTGCTTTATTGGCTGGGTTTAATCAGATCGGAGAGTCTAAGAGAGGACTTGAATTTTATACTGCTTTTCTTTCTGATGGCAACATA CCAGATCCATTTGTTTGTGCAACTGTTGTTAGTTTGTGCTCAAATTTGGAGACAGTGCTTGCTGGTACCCAAGTTCACTGTGGTATAATCAAACTTGGCT TTAAGATGGATTCATATCTTGGTAGTGCCCTTATCAACATGTATGGAATCTTTGGGATGACTTCTGATGCTTATAAATGTTTTCTTGAGGTCTGCAATAA GAATGAAATATGTATAAGTGCCATGATGAATAATTTCATTCTCAATTCAAATGATTTGAAAGCTTTAGAGCTTTTTTGTGGGATGAGGGAAGTTGTTGCA CAAAGCAATAATACAATCAGCTATGCTCTACGGGCTTGTGGGAACCTTTTTATGCTTAAAGAAGGAAGATCATTTCATTCTTTCATAATTAAAAATATAT TTGAAGATGACTCTAGGTTGGGATTAGATAATGCTCTTGTTGAGATGTATATTAGATGTAGAGTTATTGATGATGCAAAATTAGTCTTCCAAAAGATGCA AATGCCAAATGAATTTTCCTGGAGTACTATCATATCTGGATGCACTGAATCAGGGCAGTTTGTAGAGGCTCTGAGGATCTTTAAAGATATGCTTCGATCT TCTAAACCTAGTCAATTCACCTTAATTAGTGTTATTCAAGCTTGTGCAGAAGTAGAGGCACTTGATATTGGAAAACAAGTCCATTCTTTTATTATAAAAG TTGGATTTGAATATTATCCATTTGTTGGAAGCGCCCTAATTAACATGTACGCAGTATTTAAACATGAAACTTTGAATGCTTTCATGGTATTCTTGTCCAT GAAAGAGCGAGACCTTATCTCTTGGAGTGTCATGTTAACTTCATGGGTCCAAAATGGTTATCATGAAGAAGCGCTCAAGCTTTTTGCAGAATTCCAAACT GATCCTGTTTTTCAGGTTGACGAGTCTATCTTATCCAGCTGTATCTCAGCTGCTGCTGGCTTAGCAGCCCTGGACATAGGCAAATGTTTCCATTCTTGGG TTATCAAACTTGGCTTTGAAATTGATCTTCATGTGGCTTCTTCCATTACGGACATGTATAGTAAATGTGGAAACATTAAAGATGCCTGCAAGTTTTTTAA TGCTATCAGTGACCATAATTTAGTGTCTTGGACAGCTATGATATATGGATATGCATATCATGGGCTTGGGAAAGAATCTATCGACCTGTTTAACAAGGCT ACAGAATTTGGGTTGGAACCTGATGGTGTCACCTTCACTGGGGTTTTAGCTGCATGTAGTCATGCTGGGCTGGTTAAGGATGGTTGGGAACATTTTGAGT ACATGAGAAGTAAATACAGCAGTGAAGTAACCATAAATCATTATGCTTGCATGGTTGATCTTCTTGGCCGAGCAGCAAAATTGGAAGAAGCGGAGGTTTT GATAAAGGAAGCTCCATTTCATTCAAAATCTCTTCTTTGGAAGACTTTGCTAGGTGCTTGCTCTAAACATGAGAATGCTGAAATAGGAAACAGAATATCA AAGATGCTCGCTGATATCGAACTAAATGAACCGTCGACCTATGTTCTACTGTCTAACATTTATGCATCAGCATCAATGTGGAAAAATTGCTTAGACTTGA GAAATAAAATGATAGAAGGAAGTGTTAGTAAACAGCCTGGTAGTAGTTGGATTCAGTTATCAGGTTAGAATTACAGACATTTAAAGGAGAGTGCAGCATT GGCTAATGTGGTTCACCCTGCAATAGGCACTGGTGATTTTGTAACAGTTGATTATGTGCACCCTATTTAATAAATCTCAAGTCTCCACTTTTGAAAGAAG AACTTCCAATAAGTCCTACATAGAAGCCCAAACCATTGATAACGGGTCTGTTTACGAGTCTTCTATTGAATCTGTAGTTGAATCTTCTGGAGAATCAAAC GTGTAACAGAAGAAGGTCTATTTATTTTACTTGGATATCCAAATGGTATACATTCTCAAAACTGATCGTCACTCTATGGCTGAATTTTGAGAAAAATTAA TATTCTGTGTTGGAGGAGAAAACTTGAAGATGGTCAGTGTAAGTGGCATTGGAGTTCATATCTATGAACAAGATGAACCAAGAAGCATAATGTATGAGGG TAAATGCAAAAGCATTTGTGCCAAGAAAAAGTTATGTATTCTCAAGAAATCCGAACTCTGAAGGCTAAAAAGACATCACATCCTTGAAGACCAAATGTTA TAAGTCACTACAAGAACAACTAAGCCTTAATCTTACTAAGTGGGGTCATCAATTGTTCTAAGTCACTGAAGTCAACAAATTTATGTTGCTTGGAAATGGA AAAGAAGGGGTAAATTCCGGATGAATGAAGCTTTCAGATTAATAGGTTTCATGTTAGTCACTAATTTTGCATGAGTTTCTAAGATTATACCGACCGATTA ATTTGGTAATGAGAGTGATAGCAAATGAAACTAGAGTAAAATGTTTCACATTACCTGCTGGAGCACTTGCTACTGTACCAGCCATGATGGTAGAACATGA TTCTGAACTATGGGAGATGATGCAAAAGAGTTTAAGACAGAGATTCTCTAAAGGAGTCCTAAAGGCAACAAAGGGTTAAGCTTCATTTCTCCCTTTTGGA TAGGGTCCTCCAATCTGCATCGGTCAAACATTTGCTTTTCTTGAAGCCAAAATGGCTTTGTGCTTGATTCTAAAAGACACTTGTCCTTTTGCCATCTTAT ACGCCATAGAAATCACATGTCTCGGATGATGTCTCAAGCTAATCAGAGTCTTGCTTTTTATTATTTTTTGTTTTAAAAAATTCTCTTTTATTCACGTGTC AATATGTGATTGACTTGGGACAAAGAATGAGACACCGTTAGAGACAAGTGATCTTCGTCCCTTATACTCGTGCTCCATTCTCAATTTGGCACGTCAATCA TCTTACATAAGCTATATTTGGAGTTTATAACTTGTATATATTATTTCATCTATCTTCTATGTTGTGTGACCTCTAGTTATATTTGCTTAAGGTGAAATGC TATATATCGTCATACCTTCâBLAST |
Tissue | flowers |
Gene name | LI_gene_26875; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_207879
Blastp | Pentatricopeptide repeat-containing protein At3g09040, mitochondrial from Arabidopsis with 30.01% of identity |
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Blastx | Pentatricopeptide repeat-containing protein At3g09040, mitochondrial from Arabidopsis with 30.01% of identity |
Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
Kegg | Link to kegg annotations (AT3G09040) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019451882.1) |
Pfam | PPR repeat (PF01535.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |