| Id Trinity | FTRINITY_DN52625_c4_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_208008 |
| Sequence | TTTAAATCTTTCATCTCTGTCCTTGCAATTCTCTGTCCTTTAATTTTGGGAGGTGCAAGTTATTGTAAACTGATGTGGTTGATACTGTGGTAGGTTGGTG CTGGAAAAGTGTCCACATTGTGTTGCTGGAAATCTTTTTTCACCCGCTATTTCCATAATTGGTGCAAGAGCAATGCCGTATATGGTTTGCTTGCTGATTC CTCTGTTGGTGCTGTCGGTCTAATAAGAAAAAGTTCAGTCTCACTTTTTCGGTCTTTGGAAGATATTGAGCGGATTTTAGAGGGCTCTTCAGATGAAGTG GGTGCGCTCACGGGCATTGTGGATTTATTTGATGATGATCATGATTGTGAAATTCTGACTGAATTGCTTAGATGTGTAATAAGTTTCAGCCAACAGTTGG GCAAAACTGCTTCTTCCATATTTTATGAGTCACTTTTAACTGCACCAGCAATCTCTTCTGATGATATTATTCGCTGTATAGTAAAAATTCTACAAACTGG GTATTGCATATCAAGTTCAGTTATCGCTGGGGATAGTTTAGTTGTTCTGGATAATGAGCTAGCAGATCATAAAAGTTTGAGGAAACTTTCGGTTGACATG TTCTTGACACTTCAAGGCTTGTACAAAAAGGCTTCTACATGGGGCAGAATTTTAGATGTGATCGAGGGTTTCCTGAAATTTTTGGTTCCACGAAAAATCA CACATAATTTTGATACTGAAATGCCATCAAATATAAATTCCTCTATTGCAGTTCATACCACTTATCAGATTGCAGAAGTGATGTTTGAATCTGCCTGGGA TTTTCTTCTATTTTTAAGCTATCTGGTGGACATCAGTGGTCAGGTCCATTTGTCCCATGATGATATAACGCGAATACAGCTCGAGTTAGTTCCAATGCTT GAAGAAAATATTTTTGAGTGGTTAATCATCATCTTCTTTTCCATCACACCGTCTGCTCCAGCTGCAATTGAGGACTTCAATTTTAAACTTTCATCATTAC AAATAGATGGAAACATGGGGAAACGATTATGGAATGAGAAGCTTGGCCAATGTGACTTCACATTGGCTTTCATATTCTTTCTAAATGCTGGAAGTTCATC TGCAGACCATAACCACTTTTATTCAGAACGTTTTTCAAATATGCAGAGCTTTATTAATAGGACAAGAGACTTTATCAGTTGGATAATATGGGGCCAAGCT GGAGGATCTTCTACTTTCTTAAGCCGTTCAATTGATCTTGCCTTTATCCTTTTCAAGCACGGCCAGTATGGTGCTGCTGAGCAATTACTTATGATGGGGG AAACACATTTGCTAAAGGAGAGAACATCCCAAAGTATTCAAGATGCTGATGGTGGATGGTGCATACGTCATCACCTTATAGGATGTTGCCTACTTGCCCA GGTGCAGTGTGGATTGCATGCAACCCAAAAGGATAAGAAAGTCTATGATGCCATTCGCTGTTTCTTTAGGTCTTCATCTGGAAATGGTGCATCTGAGGCT CTGCAGAGTTTGCCTGATGACATAGGAATTCCATTTCTTGGTTTTAGTGGTTGTGAATCATCTGCTGCATGGAGGCTTCAGTATTATCAATGGGCAATGC AGTTATTTGAACGATATAATATTAGTGAAGGTGCTTGCCAGTTTGCTCTTGCTGCACTCGAGCAAGTTGATGAAGCTCTTTGTAGGAAAGATGAAAAGTT CATGAGCAACTCAGTTGACGAATCAATGACGATCAAGGGACGACTGTGGGCAAATGTCTTCAAATTTGCATTAGACCTTTGTCGCTATTATGATGCGTAT TGTGCAATAATTTCAAATCCAGATGAGGAGAGCAAATACATTTGCTTGAGGCGTTTCATAATTGTTCTTTATGAACAAGGTGCTATAAAGATTCTATGCC GTAATAAAATTCCCCTTATTGGTTTAGTGGAAAAGGTAGAGCAAGAGCTTGCTTGGAAGGCTGAACGGTCAGATATTTCTGCGAAGCCAAACTTGTATAA GTTGCTCTATGCGTTTCAAATGAATCAGCATAATTGGGGACGAGCGGCAAACTACATGTACCTTTATTCAGCTCGTTTGAGAACTGAAGCCGCTTTGAAA GATCACCAAGGTGGTTCCTTGATGTTGCAAGAGAGGCTTAATGCACTTTCTGCTGCTGTCAATGCACTGCATCTTGTTCATCCTGCATATGCTTGGATTG ATCCACCGTCTGAGGGAAGTTCTGCTTTGAGTGAACATTATCCGAGCAAGAAAGCAAGAATAACACCAGATGAACATTCTGATAATGATTTTGAGTCTCA AAGCTGGAAGCCCTCTATCGATATTGAAAAGCTTGAGAATGAGTTCGTTCTAACTTCAGCAGAGTATATGCTGTCCCTGGTAAATGTCAAGTGGACATTT AATGGAAAACATGGAGCCCTATCGGATTTGGCTGATCTTCTTGTCCAAAACAATTTATATGACATGGCCTTTACAATTGTTCTCAGATTTTTCAAGGGTT CAGGACTGAAGAGGGAACTGGAAAGAGTTCTATCTGCCATGTCATTGACATGCTGTGTTGATAAAGTAGAATCCACTCGGGTTGAGGAACATGGTCATTT CTTGACATCATCAAAGCTTGAGATGGTTGTCCATGGTTCACCTGTTACAGGTCCTACAACTCCACAAACTGACAGAAATAGCTTTTGGGCAGCTCTCAAG CTTTACCTCGTTCGTATCTTCTCCATCTTCTAATGTGCTGGCCCTTATTAGATTTTAGCCTGTTTGTCAGCCTTGAAGGGACGGCGGATGCATGATTGGA TGAAATTTCACACCATACTGCTCCAACCTTCTCCTCTCTTGCCTTCTGATTCCTTTTGAAATTCTTAATTCTTTGGTTTTTTACTTAGTAGTGTTTTTGG CACATGATATGGTTAGTATATGATATTATATTAGGTGAATAAGGCATAAATCGGGTGTTAAAAAATTGGATTTAAGCCAGATTCACAGCAAAGATCATCA TATACCTTCTCAAATCTAAACACTTACATAACTAGATTGAGTGCATTTAGTTCTCAGATAACTCAAGATGATCTAGACTCTGGAGTCTATCATTCACAAG GATTCCATGGTCAGGTTATTCAATAGGCTTTAGTTATTTTAATGGTCTACTATCCGACTTAGATATGTACATCTAGCTTGTGGAAAGAGATGGTTGGATT GGATCAGAACCACCATGATTTGTTTTTTGGAATGATAATTTGGTTTGGAAGTTTGAGACATTTCTTATCTTTCCCCCTATCATCATCGTGATGCTTAGAC TATTCAGGACTGGTTTTCTAATTGGTCTTTTGCCTTATTCAATGAATAGTGAATGTCCCTTTACACACTTGGGCATCTATAATAAGATTATTGCAGTCAT CTGGTGTATCATGTTTAGATATATGTTCTTTTTCAGTAAACATTAGCATTTGCTAGGACATTGTCATTTTCATTTAGGCTTGTTCGAAATTCATAATGGT TGTCTTGATACTTAATAAGTTGGTCCAGGACTTGAGTTTCTAGTATTTCACCCATACATTTAAAGGATGTAGTGTGAAACTTAATCCGCTTGCAACTTGT TGTATTGGAGAAAATGTAAGTCCTGCTCCATGTCAGCAAGACGATATTCATTAGAATTGCATTCAGCCATGTAGATGGTTACAGATGAAGTATTCCACTA TTAAAAGGTTTTTCTAGTTTTGTACCAGTTACTCAATAGGTTTTCTTCATTTTAGGCAACCTCATGTTATTTTGTTGTGGTGGTGGGGTGAGATTGTTTA TGTTGAGATTTGTTAAGACTTAAAATTGATGATATCATTATCCGATTCTGTTATTGATTAGGATATGATTATGTAATTATCTGTGATTCTTTTCCCTAAA GTCAAGGGATTTATGCTTGTATCCTTGTATTATAAATAGAGAAGCTGTGTACACAAACTACTCAAGCCATTCAGATATATTTTTCATCCCTCTCAAGTGT TTAACTCACATGTGTATCTCTGCTTAAATTTTTCTGTGTCTCTGGTTCACTCTTTCCTTCGGATTTCTAAATTGCAGGAAAAGTATAAGGAGTATCATGG TAGATTACCAGTTATTGTTGCTGAAACTCTTCTACGCACTGATCCACAAATTGAATTGCCTCTTTGGCTTGTTCAATTGTTCAAGGAGGGTCAAAGGGAA AGGATGTGGGGAATGACTGGCCGGGAGTCAAATCCAGCATCCTTATTTCAGCTTTATGTTAACTATGGTCGATATGCAGAAGCTACTCATCTTTTGCTAG AGAGCATAGAATCATTTGCTTCAACGAGACCAGCAGATATAATTAGAAGGAAAAGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_26964; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_208008
| Blastp | Nuclear pore complex protein NUP160 from Arabidopsis with 50.07% of identity |
|---|---|
| Blastx | Nuclear pore complex protein NUP160 from Arabidopsis with 48.37% of identity |
| Eggnog | Nucleoporin 160kDa(ENOG410YYM5) |
| Kegg | Link to kegg annotations (AT1G33410) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461186.1) |
| Pfam | Family of unknown function (DUF5311) (PF17238.1) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |