Ll_transcript_208663

• Id Trinity: FTRINITY_DN52643_c0_g1_i1
• Name Transcript: Ll_transcript_208663
• Sequence: CGCAATCGTTTAATTAAGATAACGATAGTCACGTCAGCATTGAGTTGAGCATAAAGTTGGAAGCACCGTCCCTCTTGTTGAAGGTCAAGTAACTGTCCCT TCACTCCCTCGACGAGTCCGCCATTTCCACCAACCCAGCAAACAATACAAATTAGTCTTCCCCGTTAAAGATAATAACACAACAAAACCCACAAACTGAA AACACCAACCATTCATTATCCCAAACCCTAAAATGGAGTCTGCCGCAGCTTTATCTCGCATAGGCCTAGCTGGCCTCGCCGTCATGGGCCAAAACCTTGC CCTCAACATCGCCGACAAGGGCTTCCCTATCTCCGTCTACAACCGCACCACCTCCAAGGTCGACGAGACCGTAGATCGTGCCCATCGCGAGGGCACCCTG CCCTTAACCGGTCACTATAACCCCCGCGACTTCGTCCTCTCCCTCACCCGCCCCCGTTCCGTCATCATCCTTGTCAAGGCTGGCTCCCCTGTCGACCAGA CCATCGCCGCCCTCTCCGAATACTTGGAACCCGGCGACGCCATCATTGACGGGGGCAATGAGTGGTATGAGAACACTGAACGCCGGATCCAGCAGGTTAA CGAGAAAGGTATTCTTTATTTGGGGATGGGTGTCTCTGGGGGTGAAGAGGGGGCAAGAAATGGACCCTCTCTTATGCCTGGTGGGTCCTACCAGGCCTAT AGTAATGTTCAGGATATTTTGCATAAAATCGCTGCTCAGGTCAATGATGGTCCATGTGTTACTTACATAGGTGAGGGTGGTGCTGGTAATTTTGTTAAGA TGGTTCATAATGGGATTGAGTATGGTGATATGCAACTTATTTCTGAGGCTTATGATGTTTTGAAGCATGTTGGGGGTTTGTCGAATTCCGAACTTGCGGA TATTTTTGATGAGTGGAATAGAGGGGAGCTTGAGAGTTTTCTGGTTGAGATTACTGCGGATATTTTTAAGGTTAAGGATTACGAGAGTGGCGATGGGTAT TTGGTCGATAAGATTTTGGATAAGACTGGTATGAAGGGTACCGGGAAGTGGACTGTGCAACAGGCAGCTGAGCTGTCAGTTGCAGCTCCGACAATTGCTG CTTCATTGGATTGCAGGTATTTGAGTGGGTTGAAGGAGGAGAGGGAGAATGCTGCGAGTGTGTTGAAGGAGGCTGGGTTGAATCAGGAAGTTGGGGCTTT GAAAAGTGTGGTTGATAAGAAGAGGTTGATTGATGATGTTAGGCAAGCTTTGTATGCTTCTAAGATTTGTAGCTATGCTCAAGGGATGAATCTTTTGAGG GCTAAGAGTGTTGAGAAAGGGTGGAATTTGAATTTCGGGGAGTTGGCGAGGATTTGGAAAGGTGGGTGTATCATAAGGGCCGTGTTCTTGGATAGGATCA AGAAAGCTTATCAGAGGAACCCCAACTTGGCTAGTTTGATTGTGGACCCGGAATTTGCTAGGGAAATGGTGCAGAGGCAGGGAGCATGGAGAAGGGTTGT GGGGTTGGCTATATCATCCGGGATCAGCACGCCTGGGATGTGTGCCAGTCTTGCTTATTTTGATACATATAGGAGAGCAAGGCTTCCTGCTAACCTTGTT CAGGCTCAGAGGGATTTGTTTGGGGCTCACACTTATGAAAGGGTTGATCGCCCCGGTGCTTTCCATACTGAGTGGACAAAAATTGCTCGCCAGAGCGGTG CTGCTGGAGTTGGAGCTTTCAATGGATGAAGATATCTTTAGTGGTTGGTTATTTGTTTGTCTGTCTGTCATATGCAGCATTTGAGTTGAAAATTAAACTT GTATGTTCCTTTGAGAATCCTTGGTTAGGCAGAACAATTATTGTTAACTTGCTACAGCTGTTTTTGCTTTTAATAAAAGAATGGCATGTCATTTGAGTTC CACAGGCTTTTTGCTTCTTTCTATGTTGTTTCCTTTTGTAGATTCCAAATTGTTGATTGTTGGTGCTTTTGTCTCGGAAACATGTTTCCATTTTGAATTA TGATAATTACATTGCATTTGTACCTTCCGAGTGATATTTTCATATATTAAAAGGATTTGCTTATAGTATCAAGATGCATGAATTTCTTTATACCGGATAG TGTAAACTGTGTTGAAGATTTATGTATCAAC
• Tissue: flowers
• Gene name: LI_gene_27098;
• Additional information: details;

Expression of Ll_transcript_208663

FPKM

• FPAB: 11.2
• FPNAB: 11.6
• LF1: 16.1
• LF2: 10.9
• LF3: 8.8
• LF4: 12.7
• UF1: 15.9
• UF2: 13.5
• UF3: 10.3
• UF4: 12.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_208663

• Blastp: 6-phosphogluconate dehydrogenase, decarboxylating 1, chloroplastic from Arabidopsis with 86.07% of identity
• Blastx: 6-phosphogluconate dehydrogenase, decarboxylating 1, chloroplastic from Arabidopsis with 86.07% of identity
• Eggnog: Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH (By similarity)(COG0362)
• Kegg: Link to kegg annotations (AT1G64190)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421772.1)
• Pfam: NAD binding domain of 6-phosphogluconate dehydrogenase (PF03446.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;