| Id Trinity | FTRINITY_DN52647_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_206878 |
| Sequence | TTGGATTGGATGAATCCATAGCCGGTGAGAGGCAACCTCGAGTGTCTCTATGGGAAATTGAGCCGTTAACAACGTTTCCAATGTACCCATCTCCTTTCCC CCTCAGGCTTAAAAGACCGTGGCCTCTAGGACTGCCTTCATACCATGGCATGAGGGATAATGATTTTGGCATGAATTCTTCACTATTGGGGTTTCAGTCT CTCGATTTTCAGGGAATTGGTATTAATCCTTGGATGCAACCAAGGCTTGATCCGTCCATGGTGAATTTTCAAAATGATATGTACCAATCCATGGCTGCTG CTGCACTTCAGGATATGAGGACTTCAGATCCTTCCAAACAGCATCCTGCTTCTTCACTTCAATTTCAGCAACCACAGAACTTCCCCAACACGACTCCCAT TTTAATGCAGACACAGATGTTGCAGCAGTCTCAACCTCAGCAGGTTTTTCCGAATAATCAAGAAAATCAGCATTCATCTCCATCTCAATTTCAAAACCAA GCGCATCTTCAGCAGCATCTGCAGCATCAGCACTCATTTAATAATCATAATCATCATCAGCAACAACGACAACAACAGCAGCAACAACAGCAAATGGTAG ATCATCAGCAGACTTCAAGTTCTGTCTCTCAGTTTGTTTCGATACCTCAATCTCAATCATCGCGCATGCAAGCTATCTCTTCGCTGTGCCAACAGCGAAG TTTTTCTGATTCAAGTGGGAACCCTGCGGCTACTGCTACTGCTTCTCGCCTGCACAATATGATGGGTTCATTTCCCCAGGTTGAAACATCCCACCTTGTC AACCTTCCGAGAACAAGTTTTTGGATGCCTGTTCAACACTCAACTGCATGGCCTCCTTCCAAGCGTGTTGCCGTGGACCCACTCCTTTCATATGGAGGAT CTCTATGTCAAGTGGAGCAGATAGGGCAGCCACAAATAACCATGTCTGAAAATGCTGTTACGTTGCCACCCTTTCCTGGTAGGGAATGCGCCGTAGAAGG GAGCACTGATCCACAAAACAATATTTTGTTTGGTGTTAATATAGATCCCTCTTCACTTCTAGTCAATAATGGGATGTCAAGTCTTAAAGGGGTCAGCGTC AATCGTCACTCATCATCCATGCCTTTTCAACATTCTAGTTACCTGAATGCCACAGGCACTGATACTTCACTAAATCCCGGAATGACACACAGCATTGATG AATCGGACTTCCTACATACTCCAGAAAATGGGGGCCGAGGAAACTCGCCAATCAAAACCTTTGTGAAGGTTTACAAATCAGGGACCTTTGGGAGATCATT GGATATCTCAAAATTCACTAACTACCATGAGCTGCGCAGTGAGCTTGCTCGCATGTTTGGCCTTGGAAGTGAGTTGGAGGATCCTGTAAGATCAGGCTGG CAGCTTGTATTCGTTGACCGAGAGAATGATGTTCTGCTCCTCGGTGATGGTCCTTGGCCGGACTTTGTAAATAGCGTATGGTGCATCAAGATACTTTCCC CGCATGAAGTGCAACAAATGGGCAACAATAGCCTGGAGCTTCTGAACTCAGTTCCAATTCAGAGGCTCTCCAATGGCATCTGCGATGACTACACCGGCCG AGACGACCAAAGAAACTTAAGCAATGGAATAACCACTTTAGAGTACTGAATGATGTTTACACTCAATACTTTAAAGTCCTTCTCCTTGTATTATTACCCT TGCTTCTCAACATTAGGGTTGGGAAGTGCTACTTAAATGTAGTTTGTAGACTACTATATAGCCTTTTATTTTCATGTTTTCACTACTTAGGACCTTTTTA TAAACTAAAACAATGTAACTATATGGCATCTTGTCACTGTACTTATCTATATACAATATATTGTTTACTAAATCTATTAGGAAGTCAATGTGTAAAGATG GTTCCTTCTATCTCTTGATATATTGATGATTTTTCTTCTTAAAAAAAAAAAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_27138; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_206878
| Blastp | Auxin response factor 6 from Oryza sativa with 45.37% of identity |
|---|---|
| Blastx | Auxin response factor 6 from Arabidopsis with 54.91% of identity |
| Eggnog | auxin response factor(ENOG410YA3R) |
| Kegg | Link to kegg annotations (4328406) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003546066.1) |
| Pfam | AUX/IAA family (PF02309.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |