| Id Trinity | FTRINITY_DN52648_c4_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_208752 |
| Sequence | CCTAGTATCAACAAAAATTTCATAAATTTATGAGTGAATAAGCATCATTTTTCTACACGCGTGTGGAGTAAATCGTTAAACAACCTGAACACCAAACAAC AAAGTCTTTTGTTTGGCTTTAGTGAGTGGAGTGCAGACAGAGAAAGAGAAATTTCGTGGAAACAACCTTCACCGTTCACCAACATTATCATCCAAACATA TCTATTCATACTCACATTCTCACTTTCTAATTCTCTTTCACTCTCACTTCTTCATTTTCTCTCAATTATTTCAAGAATAAACAATTTATGGGTGGATCAA TTTCAAAACGGAGGAGATCTAGGCAAAGTTCATCTTCAAGAGGTGCACATTCCTGGTATCCTCAATACCAATCACCTTATTTGCCACAAAACCAAGATAA TGTGCCTCAAGGGTATTATGGGAATCAACCTCAAACTCAAAGCTATGGTGGTGGTCATGCTCCAGAGCAAAGGAAGAGGCTAGATAGGAAGTATTCAAAG ATAGATGATGATTATAATAGCTTGGAGCAGGTAACTGAGGCTCTGGCAGGTGCTGGCCTAGAATCTTCCAATCTCATTGTTGGTATTGATTTCACAAAGA GCAATGAGTGGACAGGTGGAAGATCATTTCAAAGGAAATGCTTGCATCACATTGGTCATGAACAGAATCCATATGAACAAGCTATATCTATCATCGGGAA AACGTTATCTTCCTTTGACGAGGATAACTTAATTCCATGTTTTGGATTCGGAGATGGTAATTTGAGAAACATTATTAGGGATTACAGTTATGCATTAGAA TCGCATGTTCCAGTGAGTTTACATTGTGTTGGGTTTAAAAACATGCAGCATCAACACATGACCAGGAAGTTTTTAGTTTCTTTCCTGATGAGAGATTTTG TCATGGATTTGAAGAAGTATTGGGACGGTATCGGGAATTGGTCCCTCAATTAAAGCTCGCAGGACCAACATCATTTGCCCCAGTCATTGAGATGGCAATC ACCATAGTTGAACAAAGTGGAGGCCAATACCATGTCCTATTGATTATAGCAGATGGACAGGTCACGAGAAGTGTTGACACCCAAAACGGGCAGTTGAGTG CACAAGAAAAGAAAACTGTAGAAGCTATTGTTAAAGCTAGTGAATATCCCCTGTCTATCATATTGGTTGGAGTTGGAGATGGGCCGTGGGACATGATGAG AGAATTTGATGATAACATCCCTTCCCGAGCCTTTGATAATTTCCAGTTTGTGAATTTCACGGAAATAATGTCAAAGAACATGGATCGGTCCAGAAAGGAA GCAGAGTTTGCACTTGCTGCCTTGATGGAAATACCCTCTCAGTACAAGGCAACACTAGAACTTAATATATTGGGGTACAAATGTTTGATTGGACTTTAGT TTTTCTTAGGTTTTGCTGTGTTGGATATAGCATCTGTTTATGAAACCATTTAAGGTGTGTTATTTTTCAAACAGTACTCGTAGAGGGAAAGATATAGACA GGATTCCTCTGCCACCACCTCTATATGGTGCAGCATCTTTCAACTCCCCAAAAACTTCCCGTCAAAGCAGTTTCAGTCCTAGTGCACCATCTCAAGCTCA CAGACATGATGTTGGCACGGATCGCTCTGCAAGTTCTGCTTCTGATAATCAGGTACCTCATCTCTTCGCTTACTTTGCTGTTAGTTTGCTTTCTTTAGTT TGCTCCCATCATAGTAAATATCTACCTCTTGTAGTGGATCTTCTCATGTTTATTTTTCACATAAGATTAATGTGAAAGAGAGAAGCACAATGGCTTTAAA AATGACCCCTCTTAGCAGGCCCATTTAAAGTTTGGGGAGTAAGGTGTTTGTATCTATCACTATATCTCTGTACATGACCTTCTCGTGCGAAAAAAACACT CGAGAGAGGATCTAATATACATGACTTAATTCAAATTTAATCCTCCTATTGTGCTGGTGTTTCATTATTTGAACACCCAAAATACCATACCTAAATGACA TTCATCCATTTAAGTTTTACATTCAGTATTTGACACCATTCAATCCCAATGAAATAAACATATGGTTTTTCCTGAGATGTCTAATCCGGCGGTACTAAAA TTATGATTGACTTTGCTACATAATCCTTACAGTTTTGTCCCATTTGCCTCACCGATCCGAAGAACATGGCATTTGGTTGTGGGCATCAGGTAAGGAAGCA AAGCTCTTGGCTGTTTTTTCTTATGCATTTTAGTTGATTGGATGCTTATTAGGCATGTGAGTCGTGTTTTTTTAATTTGCAGACATGCTGCGAGTGCGGA CAAGATCTCGAGCTATGCCCCATTTGCAGGAGTGCCATTGACACTAGAATAAAACTTTATTAGAAGATGATATCTTTGAAATCTTGTCATGATTTTTCAT GTTGAGGTATGAAACCACGAAAATGTTTGCTTATTAACTTCACATTGTAAATATTATTGGTATTTATTCGTTTAAGTCTATGCTTTAAGCACATTTTATA TTAGAGTTGGGTTTTGGGTTCTGTGTTATATCACATTAAATATTAATATTAATTGTGTCCATTCATCAATTGGTTCAAAACAAGGATGTTTCTTGAATCC AATACCAAAAGTTTTCTATATATCTGTACCAACCGAATGATATTTTGTGAAATACATAAATGTATTAGTAATCAGAAATTAAATGAGGTGTTATTTATTA CTAGGTAAAATCCTATTAGGTTGGTATAGAGACATAAAAATTTTGTTATAGAGGATTTGGGTTCCATTTTGATGTCATATTTTAAATGTTGAAATAGAGA ACTCACTTCAAGAATACAACTATGAAATTTGTTGTCATTTCATACTTAGAAGTTAAGCGTTTCTTTGATATTAAAGTTTGTTGTTTGTACTTATTTTAAA AAAAAAACAAGTTAAAAGTTAGAAGTATGTTTATAAGTTCTTGAACCATGTTACTACAATGTGAGTAATCCTTATAATGAACTTGGGAATGATGTGCTAC ACCGTGGTATATATATTATAGAGTGTAATATCTTTCTGTTGGTTGTATATAGATTTATACATAATTATTATATTATCTACTATTTATTTATATTACTTTT TAATGAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_27154; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_208752
| Blastp | E3 ubiquitin-protein ligase RGLG2 from Arabidopsis with 74.77% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase RGLG2 from Arabidopsis with 80.9% of identity |
| Eggnog | copine family(ENOG410XPC8) |
| Kegg | Link to kegg annotations (AT5G14420) |
| CantataDB | Link to cantataDB annotations (CNT0001359) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003526988.1) |
| Pfam | Copine (PF07002.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |