| Id Trinity | FTRINITY_DN52651_c4_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_207408 |
| Sequence | CTTCCAGCTCTTCGAGAAGCACCGTCTGTTAAGCAGATTGATGGGGAATGGAGGTATGACTCAAGGAATTCCATTTTGGAGTGGTCTGTCCTTCTGATTG ATAATTCAAACCGCAGTGGGTCAATGGAGTTTGTCGTTCCGCAAGCAGATTCATCAGCATTCTTTCCCATCTCGGTCCGTTTTACGGCCACCGAGACATT CAGTGACCTGAAGGTTATAAACATTATACCGCTAAAGGGTGGTAATCCTCCCAAGTTTTCACAGAGGACACAGTTGATCACAGAAAACTACCAAGTTGTT TGAATGATTTAGTCTGGTCTATGAGCTTAAGACAGTTTTGCTACTACAGTCGTGCTTCTTTTATCAATAAGCTTCGCCTCCCCGAGTTATATCATTTCTT ACTTACTATCCATCAACTTTTTGTTCTTACTATTCTTGAATTTATGCTTTATTTTTATTTTTATTTTACAAGACATGGAGTAAAGTATGAATCATCATAA TTAATGACAAACTTAAGTTTGCTAACGTTTACATATTTTTTTTTTAACATTTTGATAATTGTATTATATAAATATATTTCACTTATAATATCCTTAATAA TAATGCTACACATCTTTTTATTCTTTAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_27182; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_207408
| Blastp | Coatomer subunit delta-2 from Oryza sativa with 79% of identity |
|---|---|
| Blastx | Coatomer subunit delta-2 from Oryza sativa with 79% of identity |
| Eggnog | The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins(ENOG410XRH2) |
| Kegg | Link to kegg annotations (4338376) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452390.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |