| Id Trinity | FTRINITY_DN52665_c4_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_206857 |
| Sequence | TTGGAGCAGTGGACTTCGTTTTGGTGAGGATTCTGATTCATTGTCTCTTTCTGTTGCAGTGAATTCTTGTATAGATTATTTAAGTATTTCTTTGCTCTTG TGAATTGAGAATGAAAGCTTCAGTTATATATCACTGGCACTGTTGATACTTGATACCAACTTATAGAGATGGATCTCTACCATTTTTTCTCGCTTTGTTT GTTTTGCAGTAGCATCAGCTTCTTCTGTTTATTCTTACCACAACGGCTTTATTACGGTTTGCACAGTCCACGTCAAAAAAAACTTAAGGAAGATTTATCC CTTTTATCTATTTTTCGTGAGGGAAGATCTAAAGCAGTGCTATCTGAACACGTCGTTCTCTAATGGACGCGTGCTCCTCTGGAGAAGAAGTGGTTGTTAA GATAAGAAAACCGTATACAATAACAAAGCAAAGGGAACGGTGGTCAGATGAGGAGCATAATAGGTTTTTGGAAGCCTTGAAGCTATACGGGCGAGCATGG CAGCGTATAGAAGAGCATATAGGGACAAAGACTGCTGTGCAAATCAGGAGTCATGCTCAGAAATTCTTTTCAAAGTTGGAGAAAGAGGCCATCGTAAAGG GTATATCAATCGGGCAAGCTCTTGATATAGAATTTCCGCCTCCACGGCCTAAAAGAAAACCAAGCAACCCTTATCCCCGTAAGACAAATGTTAGTTCCCA AACAATAAATAGTGGATCAAATCATGGAAAGCTTCTCATTTCAGCTGCATCTCCACATGGTAAAGAAGCACTGGACTTGGAGAAAGAACCGCTTCCAGAG AAGAACAACGAAGATGAAAGACCAACAATTGTAAATGAAAACTGCTCAAAAACATTGACTATTATCCAGGAGTCACCCTGTTCATCTGTATCTTCAGCAA ACAAGAGTTCAATATCAGTGTCAGTGCCACTGACAAATTCACGCGCCTTAAGGGAATTTAGACCGTCAGTGAAAGAGGTATTAACTCGAGATGAAACAAA TGAATCTTTTGTCACAATTGAACTTGGAAATCAGAAGTTGGAGATAAATGGTGGCAAACACACACAACAGACTAATTTCACCTCCAATGCCTCTAAATTG GAGAGTTCTGATGCTTCACAAGCAAAATCAGTTCAAATTGAGAAAAGAGATTGTCTTAATTGTGCATTAACAATAGATGGGATGCAAGACAATCAGAATT ACCCAAGACATATCTCTGTGCAAGTTGTTGATGGAAACCACGAAACTAGTACTCAAAATCCATCCGAAGATAAATTGTTTCGAGACTCCATGTTTCATCC AGTAGAAGTGGTTAGTGAGCAACATAATCTTTTCACCATTTTAGCTCCATCAAACACATGTGAAAATCAAAGTAACGATTCACAGTCCTCTATTCATGAA TCATTTCTTCACTGTCCTCCTTTCCCACAACATAATCATGATGATTACCAGTCATTTCTTCAGATGTCCTCCACATTTTCAAACCTTATTGTCTCTGCCT TGCTGCAAAACCCTGCAGCCCATGCTGCAGCTAGTTTCGCTGCTACATTTTGGCCCTATGCTAATAATTTAGAAACTTCGTCCAATTCTCCGGTGTGTGC TCAAGGAGCATTTGCATCTAGACAAGTTGGCTCTCCGCCAAGTGTGGCTGCTATTGCAGCTGCTACTGTTGCTGCTGCAACTGCATGGTGGGCAGCCCAT GGAATGCTTCCGTTGTGTGCTCCACTCCATACTGCTTTTCCATGTCCTCCTTCATCACCCGTTGCGGTTCAGTCAATGAATGTTGGTGAAGCACCACCAG AAACAAAACATGGAGAGATCACTGTACAAAATCCTCCTTTGGAAGATCAGATGTTGGATCTTGAGTACTCTAAAGCTCAGCAAGCTCAACAACATTCACC TTCTAAGTTACTGGTTGTTTCACCATCCGAGTCTGAGTTGAGTGGGGTTGCCAAGTTAAATGCTTCCTCTAAGGCTACAAATCATGGGATGAACCATGCG ATTTCTAAGCATGTCGATTCGAGCAAAATAAAGGGCAGAAAACCGGTTGAACACTCCTCATGTGGTTCCAACACAGGCTCTAGCTGTGAAGAGACAGATG CACTAGAGAAGGATGAGAAAGAAAAAGAAGAGCCTGAACCTGAAACACATGTTGTGAACGATTTAGCTGCCGACCCTAGCAACCGGTGTGATACTAATAG TAGAAGCTTAAGCTACCTTACAGATTCTTGGAAGGAGGTCTCTGAAGAGGGGAAACTAGCCTTTCAGGCTCTATTCTCAAGACAAGTGTTGCCCCAAAGC TTTTCACCTCCGCAAGACAAAGACTACAAAGATAAAGAAGACCTCGAGAGTAAGAAATGCAGTTCTAATAGCAAACCGGTGCAGAAAAACCTGCCATCTA TAGAAAATAACACTAACAGTAGTGAGGAGGGATTGCTAACCATAGGTCTTGGACATGGAAGGCTCAAAAATCGCCGAACCGGGTTCAAACCTTACAAAAG GTGTTCAGTAGAGACCAACGAAAACAAGGTAGGAAACCAAGGTGACGAGAAAGGTCCTAAAAGAATACGCATAGAAGGGGAGAGTCCAAGTTGAAGATTG ATATATATGCATGCAATCACATAAAGGAAACACCTCTCTTTCAGCATATATTATTTTTCTTAGCTCCCTTGTTTTGTGTCTGTATTGCTTAATTTCAATT TCCACAGGTCACGAAACTTGTCATGTTCGTGTTTATTCGTGTACCATATTGAAGTGCTTTTGCTTTCTTGCATTGATGTTACTCCAGCTAAAATAGATTT AGCTAAGCAAAAAGTACTATTTGAGAACTGAACATTCAAGTGATTTATGATCCTTCGTTCAGTCATTTTCTTTGTTTTTTACTTATAATTGTTCCACAGT TGTGAACTATTTTCTTCTACTCTAAACTTTGTTCAGATTGAACAAGTTTTTCCTCAACAGAAATTGGCCCAAATGCTTTTCTTTATGAATATGATTGTGG CAGTCAAGTGCATATTTAGTGTGAGGAATAAATTATGTTTTCCTTGTTTTTTATATGAAGTTAACTACTTTCTTCATACAGTTCCTTTAGATTGTTCCCT TTATATTGTTCCATATTGCAAAATGCATCATACCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_27277; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_206857
| Blastp | Protein LHY from Arabidopsis with 42.22% of identity |
|---|---|
| Blastx | Protein CCA1 from Arabidopsis with 36.7% of identity |
| Eggnog | Transcription factor(ENOG4111HV1) |
| Kegg | Link to kegg annotations (AT1G01060) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440469.1) |
| Pfam | Myb-like DNA-binding domain (PF00249.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |