| Id Trinity | FTRINITY_DN52675_c5_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_207578 |
| Sequence | CAAACTATGCCCCTTTTAAAAGTTTCATTTTCTTTTATGATCCCATGATCACAGAAAAATATGAAGTTCTGCAAGACTTACCAGGACTACATGCAAAACC AGCAGTAACAGAACCTCCCTAGGCTTTGTTTCAAAAAACTTAAGAAGATCATGAAGACTTGTAGGCAAGATTGTCATTCCCAGAAAACCATTTATGCTAT CAAAACTTGTTCTGATCAATGCCCAGTGTGTGATGGAATGTTTTTCCCTTCTCTTCTCAACGAAATGTCAGATGTATTGGGCTGCTTTAATCACCGTGCA CAAAAGTTGCTGGACCTACATCTTGCTTCTGGCTTCAGAAAGTATCTTTTTTGGTTGAAAGCAAAATTACAAGGGGATCATACTGTTCTAGTTCAAGAAG GCAGAGATTTAGTCACTTATGCACTGATAAACGCCATCGCAATTCGGAAAATACTAAAGAAATATGATAAGATTCATTACTCGAAGCAAGGGCAATTATT CAAGTCACAAGTACAGACTATGCACAAGGAAATTCTTCAAAGTCCATGGCTTATTGAGCTTATGGCCTTGTACCTCAACTTACGGAGAACTAAGTCGGAG TCGATGAAGGCGCCGGCTTTATTTGATGGCTGTTCCCTCACATTTAAGGATGGAAAGCCATCACTTACTTGTGAGCTCTTTGATTCCATCAAAATTGATA TAGACCTGACTTGTTCTGTATGCTTGGACACAGTATTTGATCCAGTTTCTCTGACTTGTGGACATATATTCTGCTACAGTTGTGCTTGCTTAGCTGCATC CACGAGTATTGTCGACGGACTTAAGGCTGCCGATCCTAAAGAGAAATGTCCTCTATGCCGAGAGGAAGGAGTTTATGAAGGTGCTGTGCGCTTGGAAGAG TTAAATATTCTGCTAGCCAAAAACTGCCATGAGTACTGGGAGCAGCGTCTTCAGACCGAGAGGGTAGAGAGGATCAAGCAAGCTAAGGAACACTGGGAAT CACAATGTAGGGCATTCATGGGTGTCTAAAGAGACACCCATGCAGCTTAAATAAATATCTTAGATTGCAAACATGTTGATGTACATTTATTTGATTCATA TTATGTATTAGATTCTGGATAAGCACTTTTTTGACTGATTTAGTCATATATTTGTGAGCAATGATATTCTTACATTGCTTTTTCTTCACAATTTTTATTG TACATACATTATAATATCCCTTTTGATTGCATCAGTATGGTTCTCAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_27333; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_207578
| Blastp | Probable E3 ubiquitin-protein ligase BAH1-like 2 from Oryza sativa with 63.79% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase BAH1 from Arabidopsis with 63.58% of identity |
| Eggnog | E3 ubiquitin-protein ligase BAH1-like(ENOG4110S99) |
| Kegg | Link to kegg annotations (4344254) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452638.1) |
| Pfam | RING-type zinc-finger (PF13445.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |