Ll_transcript_207443

• Id Trinity: FTRINITY_DN52677_c0_g1_i5
• Name Transcript: Ll_transcript_207443
• Sequence: AAAATAATATTAGAGCGAGGAAATCGCAAAGGAGTGTGACAAAGCTGTAGTGAGTGAGAGAAAGAGAACACAGAGAGTGAAGCAATGGCCGAGTACGAAG AGATATACGAAGAGAACGGAGAAGAGAAGGACCATCACAATTCTCACGCCCATTCCGATTTTTCTCCGCCTCCGAACGCTGATCTCACTGAATCCAAATC TCACTACGGATCTCGTGATTATGGTAGAGAATCTTCCAGAAGCAGAGAAAGGGAACGAGAGAAAGGGAGAGAAAAGGAGAGAAAAAGAGATAAGGGGAGG GACAGGGATAGAGAGAGAAGCGGAGATAGGGAGAGAAGCAGGGATAGGGAGAGAAGCAGGGATAGGGAGAGAAGCAAGGACATGGATAGAGAGAAAAGCA GAGATACGGAGAGAAGCAGGGACAGGTATAGAGAGGGAAGCAGAGAGAGGGAACAAGATCAGGATGGAGAGAATGAAAGAGACCGTGACAGGGACCACCA TCGTAGAGATCGGCACAGGGATCATAGTGAGAGAAGGGAAAGGGGAAGAGATAGAGATGACGATGATTATTACAGAATCCGTGACTATGATAGACGAAGA GATTACGACAGAGAGGATAGGCATAGGCGCAGGTCCCGGTCTCGATCTACTTCAATGTCAAGGCGTAGATCTGAGCATAGATCAAGATCTCGTTCTCGTT CACGTTCAAAAAGGTAAGTCATGGGAAGATCCTTAGCATCAAGTGTATAAAAATGAATGGCTACATGTTGCTTGTGACTGTCATTTTGGAAAATCCTAAT TTCTGTTTCATCATAAAATAAAATAGTTGGCACATGTGCAAGTGAAACTAGTGTAATGATGTTGTGAATGGCTGTCAATTAGAGAAATAGTTAATATAGT TGAAAAGCTGTTTTATTTCAGATCTTATTTCCAATACTTCCTTCATAATTTTAGTTTGAGAGAAAATATACAATTATATTTCTTGGCTGAAATATTGTTT ATGACCACATACTGTGTATTGATTACTACATTAAAATCTCTCCTTTTGAATTGTGTTAGATCATTAGATGCGGTTTTGTTTTACTTTGTCTTTTTTCTAT TGTTTTGCTCTTTCACGTCCCTTTAGAGTTTAGATATGGTCGAATCTCAAATCCTCAATGTTTCCTCTTACTTTGAATTTATGAAAATATTTGTATACAC TTACATATATATTCTATATGAGTATTTTAATTATTATTTTCATAATATCTTTAGTTCATTTTGCTACTGATAATTTTATAGAAGAATTATTAGTGGATAG TTATACCCAGATGTAGACAGAAGATTCAAATACAGAATTACAGATTGATTGTATCTATATTTGGAAAAAACACCATAATTGGCTGTGAAACGATTTTGTA ATGTATTACACAATAATGGTGCTAATTGTAACATTAGAAACCAGTTGGAAGTTCCGTGTTAATTGACCATTTATTGTTGGAGGTTATAGATTTTCCCTGC AATTTGTAGTTTTCAAATGCTATTTATTAATTGCTATTGTCAGAGCCACATATATATTATGTCAACATTATAGTTTTACTGTGGATGATGAGCTTGGTCC AACAGTGAGGTTGATGCTTAGTGACCATGAGATCATGGGTTCAAGTCTGGAAACACCCTCTCGGCTTGCGGGGGTAGAGCTGTGTGCGTCTACCTTTCCC ATACCCCACTGAGAATCTCGTGTACCGGACCACCCTTTTATTATAGTTTTACTGCATTCAAATCCTGTTAAAATACAGTTATTTTCAGTGACTTCGTACC CATTAATATGTTTCTCCCACATGATTTTTTTTTGTTAATTGAAAATACCACTAATGTAAATGTGCTACAAATCTTAAGTTCATATTTTATATATTTCAAT ATTCTGAATAGAATTTATCCACCTATTGTAAAATGTTTCTTGGCATGAAAGGTCACATGTATTATTGGAATACTAAATTCATTTACTTACAGCAAAAGGA CTAGTGGTTTTGATATGGCTCCCCCTGCTTCAGCACTGTTAGCTGGTGCTTCTGCTGTTACAGGTACATTTACTCTCATATATCATGCATCTGATTTTTT AATCTTAACTGCTTTGTTCCTTTTGTTCTAGTATGGAAAATTCATATCAAATTGCATGGTGCTTACTTGGTAAGAAATGTTCTGTTATTATATGAATATA TAGCTCCTTGAAGACTGGTTTCCCATGCTCTGTAATTGTCTTTCTTTTAACTTTTGATTTAATTCTGGAACTAAAAGATGCTTTGGTTTTTGTCTTGTGT TTGGTGTTTCTTTTGTTTTTGTCTTGTCTTATGTTCTAAGAAGGCAATGTTGGGCTACTAGCCCCAATGTGCTGACAATGGCCTGAGCCGACATTTGTAG CTTTATTGTCCACGGAGGAATGAATGCACCAGTTTTTGGTGGGTCTGGTTCGTCTACATCTGGAAACTGTTGGCCACTTTGGTAGACTTGCAAATATTAT CTCTAAAATTTGTTTAGAATGTTCCTTTGATCTTGTTAAAATGATATATGCATTGAGCTTAAATTATGCTTAAGCTGATGCAAATTGGGGCTAAAGGAGT CATTTGATACTTATGCATTACCACCCAAAAAGATTAAAACACAGTTTGTTCTGAGATACAATACCTTTCTGTACCCTTTGCAGGTCAGATGATTGCGACA AATGCTGCAATTCCTGGAGTGTTTCAAAATATGTTTCCATTGGCTACAAGTCAGGTGCAGCCATTCAGTGCTCTCCCTGTCATGCCAGTGCAGGCTATGA CACAACAGGCTACTCGACATGCTAGGCGGGTGTATGTTGGGGGCCTCTCTCCTACAGCCAATGAGCAGTCAGTTGCTACTTTCTTCAGTCAAGTTATGGC TAACATTGGAGGGAACACTGCCGGCCCAGGTGATGCCGTGGTCAATGTTTACATTAACCATGACAAGAAGTTTGCCTTTGTAGAGATGAGGTCCGTTGAG GAAGCTAGCAATGCAATGGCTTTAGATGGTATTATTTTTGAGGGGGCACCTGTTAAGGTTAGGAGACCTACTGATTATAATCCTTCTCTAGCTGCTACCT TAGGCCCAAGCCAACCTAACCCAAATCTTAACCTGGGTGCTGTTGGCTTGACACCTGGGTCGGCTGGTGGACTTGATGGGCCTGATCGGATTTTTGTGGG TGGACTTCCTTATTACTTCACTGAAACACAGATCAGGGAGCTTTTAGAGACATTTGGTCCTCTAAGGGGTTTTGATTTGGTGAAAGACAGAGAAACTGGA AACTCGAAGGGCTATGCATTTTGTGTTTACCAAGACCTTGCAGTTACAGATATTGCATGTGCAGCTCTCAATGGAATAAAAATGGGAGATAAGACTCTGA CTGTTAGACGAGCTAATCAAGGTTCAAACCTGGTGCAGCCTAAACCTGAGCAAGAGAGCATTTTAATGCACGCACAGCAGCAGATTGCCCTGCAGGTTGA AGGGATTGTCACTTCAAATTTATTTGCCTAGATCTGTTGTGCATGTGTTTAACAGTCTAATTGCTATATACTTTGGATTTCTGTAGAAACTTATGTTACA ACCAGCATTAGTGGCAACAAAGGTGGTTTGCTTAACTCATGCAGTTGCTGCTGATGAACTCAAAGATGATGAGGACTACGAAGAGATTCTTGATGATATG AGACAGGAGTGCTCCAAATTTGGTACTTTGGTGAATGTGGTGATCCCTCGCCCACGACCAGATGGTGAACTGGCCCCTGGAGTTGGAAAGGTGTTTTTGG AGTATGTTGATGTTGATGGTGCTACAAAAGCCCGTGTTGGATTGAACGGAAGAAAATTTGGTGGAAATCAAGTTATAGCTGTGTTTTATCCAGAGAACAA ATTCGCCCAAGGAGATTATGAAGGCTAGTTGAATTGCTATGACATTGTATCTTAAAAGATTTCTTCTTACAGGAGCTGCATGCATTTCGTATAATACAGA AACTTATGGATTCTATTTTATTTTATCTGATGGCTGTAAGATAGTGATTGCGATTATGGAGAATGGGTAGGGATGATGAAAAGGTACCAAATGCAAAACT ATGAAGATGTTATGGTAATTTGTTAAAGGGCAAGGATATCTAAACACCTCCCTTACTTTTACTTGCAATCCCAATTAGCCGTAGATATCAAATATCTAAA TACTCATGGGTTGAAAATAGATGACAGGCTTAACAAGGGTTGAATTGTGATAACCC
• Tissue: flowers
• Gene name: LI_gene_27347;
• Additional information: details;

Expression of Ll_transcript_207443

FPKM

• FPAB: 0.2
• FPNAB: 0.2
• LF1: 0.2
• LF2: 0.5
• LF3: 0.2
• LF4: 0.3
• UF1: 0.2
• UF2: 0.3
• UF3: 0.3
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_207443

• Blastp: Splicing factor U2af large subunit A from Nicotiana with 87.22% of identity
• Blastx: Splicing factor U2af large subunit B from Nicotiana with 86.4% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0000929)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440705.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;