Ll_transcript_207948

• Id Trinity: FTRINITY_DN52696_c1_g1_i1
• Name Transcript: Ll_transcript_207948
• Sequence: GCACCTTTCTAACCTCTCTCTCTTCTTTTCTCTGAGTAAAAGTAAAATTAATATATGTGCCACCTTATATCCCAAGTTTCCATCACACTATAGTATCAAG CAGTGTGATTCACTTTTTCATCTCTGCAAACAAAGGGAGCAAAAGATGGCCCTATGTAACGAAATTATTGGTTCTTCATTCATAGAAAGATCCTCCACAA GAATCCATTTACAACAAAAACAAAACTTGTTCTTGGGTAGGTCTGGGTTTGTTCCTTTGAGAAACAGAAGAGTTGTGAGGTTGAAGAAGGTTGCTAAGTT TCCAGTGGCAGCTCTCAGTACAGATTTGGTGAAAGTTTCTTCTTCTTCTGTACCTGTAGAGAAACCAGTGAAATTCAAGGTTCGAGCTGTGGTGACAGTG AGGAACAAGATCAACGAGGATTTAACAGAGTTACTTGTGAAGCGATTTGATGCTATTGCTGACAATTTTGGAAACAGTGTTGGGCTTGAGCTTCTTAGCA CCGATATTGATCCAAAAACAAGGGCTCCAAAAAAGACTAATGAAGCAGTGCTAAAGGGCTGGTCAACAAAATCCAATGTAAAAGCTGAAAGAGTTGATTA CATAGCTGAATTCGTTGTAGACTCTAGTTTTGGACTGCCAGGAGCTATCACTGTTACAAACAGACACCAACAAGAGTTTTTCTTAGAAACTATAACCATT GAAGGATTTCCAAATGGAGCAGTTCATTTCCCATGCAACTCATGGGTACAAGCTAGGAAAGATCTTCCTGGAAAGAGGATTTTCTTTTCTAATAAGTCTT ATTTACCTGGCGATACCCCTTCTGGGCTGAAATATTTTAGGGAGAAGGAGTTGAGAAATCTGAGAGGTGATGGTAAAGGGTATAGAAACTTATCTGACAG AATTTATGACTATGACATATACAATGATCTTGGAAATCCAGATCTTGGTAATGATTTTGCAAGACCAAATCTTGGAGGATCAGAAAAATATCCTTACCCA AGACGCTGTCGTACTGGCCGAGGCCCTATGGATTCTGATAATACTGCAGAGGTTCGAGTGGAGAAACCACTGCCAATGTACGTGCCAAGAGATGAACGAT TTGAGGAGTGTAAGCAATACACGTTCGCTACTAAGAGGCTCAAAGGAGTGCTACATATCTTGATTCCTAGCCTTATGTCTAGCCTTTCTTCCGAAAACGA AGACTTCAATGAACTATCTGATGTTGAAAGCCTTTATACTGAAGGGTTGCTCATTAAATTGGGATTCGAAGATGACTTTTTGAAGAATCTCCCTTTGCCT AAAATGTTCAGCCAGGCCCAGAAATCCAGTCAGGGAATTCTCAAGTATGACATGCCCAAGATCCTTACTAAGGACAAATTTGCTTGGCTGCGAGATGACG AATTTGCCCGTGAAGCAATTGCTGGAGTTAACCCAAGTAGCATTGAGAGGCTTAAAGTTTTCCCACCCGTTAGCAAGTTAGACCCTGAAATATATGGTCC ATTAGACTCTGCTCTTAAAGAAGAGCACATTTTAAGTCAACTTAATGGCATGACCGTCCAACAGGCATTAGATGAAAACAAGCTGTTTATGATAGATTAT CATGATATATACCTTCCATTTGTTGAAAGAATCAATGCCCTTGATGGTAGAAAATCATATGCTACTCGTGTTATTTTTTTCTTGACACAAAATGGTACTC TCAAACCTGTGGCTATAGAACTTAGCTTGCCACCTGCTGGACCAAGTTACCAATCAAAACGTGTAGTTACACCTCCTCAAGACGCAACTAGCAATTGGAT ATGGATGCTTGCTAAGGCTCATTTTTCCGCCAATGATGCAGGGGCTCACCAACTTGCACATCATTGGTTACGCACACATGCTTGCATGGAACCTTTCATA TTGGCAGCACATAGGCAATTAAGTGCTATGCATCCAATTTATAAGTTATTGGATCCACACATGAGGTACACGTTGGAGATCAATGCTTTAGCTCGACAGA GCTTGATCAGTGTAGACGGAGTCGTTGAGTCGTGCTTCACTGTTGGCCGCTGTTGCATGGAGCTTAGTTCCAGTGTTTACAAAAGTGCTTGGCGCTTTGA CATGGATGCTCTTCCTGCAGATCTCGTCCGCAGGGGAATGGCAGTACCTGATTCAACCCAACCACATGGTTTAAAGCTACTAATAGAGGATTACCCTTAT GCTGCTGATGGGTTACTCATATGGTCTGCAATTGAAAACTGGGTTCGTAAATATGTAAATCATTATTACACAGATTCAAGCATGGTAAGCGATGACAAAG AGTTACAAGGTTGGTACTCTGAGACTATCAATGTGGGTCATGCTGATCTTAAGGATGCAAGTTGGTGGCCAAAATTAAACACCAATGGAGATCTTATTTA TATTCTCACCACTTTCATTTGGAATGTTTCTGCATTCCATGCTGCACTTAATTTTGGGCAGTATCCTTATGGTGGATTCGTGCCGAATCGTCCACCATTG ATGAGAAGATTGATTCCTGAAGAGAGTGACCCAGAATATGCTAACTTAATAGCAGATCCACAGAAGTTTTTCCTTCACTCATTACCTAGTGTATTGCAGG CTTCAAAATATATGGCTGTGGTTGATACATTGTCTACTCATTCACCTGATGAGGAATACTTGGGCGAGAGGCAACAACAATCTACTTGGTCAGATGAGCC TGAGATTGTTGAAGCATTCTATGAGTTCTCGGCCGAGATTGGGAGGATCGAGAAGGTGATCGATGGTCGAAACCGTGATACGAATTTAAAGAATCGTTGT GGTGCTGGGGTGTTGCCTTATGAATTACTTGCTCCAAGTTCTGATAGTGGTGTTACTTGCAGAGGTGTTCCAAATAGTGTATCCACTTAATATTGTAAAA ATAAATAATAGAATCACATCTCATATTATCGAGAGTGTTTGGATTTTGGAATAAATGACAATAATAATTAATGTCAGTAGGTATTGTCATATTGTTAATA TAAGGGTGTAAAAACTATATATCTATTAAAAGTGTCATTTTTTTATACATTTCTTTTAGGATTTGTGAATTTTCCTCGTACTCAGAAAACTTAATGAAAA
• Tissue: flowers
• Gene name: LI_gene_27476;
• Additional information: details;

Expression of Ll_transcript_207948

FPKM

• FPAB: 2.5
• FPNAB: 1.3
• LF1: 3
• LF2: 0.7
• LF3: 0.4
• LF4: 0.5
• UF1: 2.5
• UF2: 1.2
• UF3: 0.6
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_207948

• Blastp: Linoleate 13S-lipoxygenase 3-1, chloroplastic from Solanum with 70.42% of identity
• Blastx: Linoleate 13S-lipoxygenase 3-1, chloroplastic from Solanum with 74.22% of identity
• Eggnog: Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity)(ENOG410YN4N)
• Kegg: Link to kegg annotations (102597498)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433919.1)
• Pfam: PLAT/LH2 domain (PF01477.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;