| Id Trinity | FTRINITY_DN52696_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_207953 |
| Sequence | GTTGATGATAGATTATCATGATGTGTACCTTCCATTTATTGAAAGGATCAATGCCCTTGATGGTAGAAAATCATATGCTACACGTACTATTTATTTCTTG ACACCCCTTGGTACTCTCAAAGCTGTGGCTATAGAACTTAGCTTGCCCTTTGCTGGACCAAATTACCAATCAAAACATGTAGTTACACCTCCTGTAGATG CAACTACCAATTGGATATGGCAGCTTGCTAAGGCTCATGTTTGCTCTAATGATGCTGGGGTGCACCAACTCTTTCATCATTGGTAAGAAAAGCACCTATT TTTTTGTATCAATTAGTGTTTTTTCTTTATTACAAGGTAAAATTTACTGTTGAGCTAGGTGCATAATTCTAATGTCAAGGCATGTCTAAAGATTCAATGA GCATAAGACTAATGTTGTTATAGCATAAGCAATCATTCTGTAACATTGGCAATAAGCAATTAGATAACAGGTAGAGAATAAATATAAGAGAAGAAGAAAC GAAATTTGTTAATGGAGTTCAATCAATTGTGCTTATGTCCTTTGAAGCGTTGAGCGGCTGCCATTATATTATTAGGGATTAAGATTACAAGCTCTAACAC ATCAAGTTAGAGCGTGCATAATACATATACTGATATACATATCCTAGTACCTCAACCTTGATTAAATTATTCAGCTCTTTAGGAAATCTACTCCACAAAC CTTAGAGAGATGCCACTCTTTAGGAAATCTATGCAACAACCAACTTAATGATTATCATTTACTCTTACTAGTTGTGCCAAACTTCCAACCATTCTTGACT TATCAATTCTTGTTTCAAAGTATTAGAATTTCTATGGAGGTGGTTAATTTTTTCTTTGTTTAACTTTAGATAGCATTACCCAAACATGGTTGCTTTGAAT CATTTTTTATTCTTTCATATGTTGGTTGCTAATTGTTTACTTTGTTTAATTGTATATAGGTTACGCACACATGCTTGCTCAGAACCTTTTATATTGGCAG CTCATAGACAATTGAGTGCTATGCATCCTATTTTTAAGTTATTGGATCCACACATGAGGTACACCTTAGAGATCAATGCTTTAGCTCGTCAAAGTTTGAT CAATGCCGACGGAGTCATTGAGTCTTGCTTCACTCCTGGCCAATATTGCATGGAGATTAGTTCATCTGCTTACAAAAACTTTTGGCGCTTCGACATGGAT AGCCTTCCTGCAGATCTCATCCGCAGGTAAATAAATCGATAAAGTTTTAGTCTGTACATGTTTGTGTATATCTGGAAAGTTATCAAACTTTAGTTTGATG TGCAATTGGTGTTTGCTTAATGGTGTATGCATGCAAAATGCAATTGAATCTAACAAACTTCGGAAACTTAATTTCAATGTGACCTTGCTGTTTGCTTTAT CTGGTGTATGCAAAATGCAGAAAGATCTAGCAAGCCTATAAATATGTAGATTAGTGGTTTACCTATTTGTCAATATTTGGAAAGTTGTCAAACCTATTTT TAATGTGGAATTGGTGTTTGCTTGATCTGGTGTATGCAAAATGCAAACAAATCTAACACAGTAAATCAGGATCTAGATTTTTGTCTATATCTGAAAAGTG AATAGTTATGCTGTATTCAAAAGGCAAATAAATCAAACAAAGTAAATAAATATATAGATTTTTGTTTACATATTTGTCTATATCTGACATCTCCAAAGAT TCCAAACTTATTTTTTATAGTAATAATATTATGTGTACACCCAAATTTGACATCAAACATGTAGAAATTTATGATGGTAAAGGTTGGTCCAACTCAAATA TGAGTTAGTCCAAGTAACTTATTATACAGGCAAAAGTTTTTATAAACGATATGATAATAACGATCAAAATAATAACTAATAAGATAAACAAAACTAAGTA AATCCTAGATAAGATAATGCTCTATCAATGCCAATATATCTAACAAAACTTCCTTTTAGAGAAAGAAAAGGCACACACAACATTACTCTATTCTTAAAGT GCAATTGGTGTTTGTTTTAAATGGTGTTAAGGTTTTCTGTTTCGACATTGCAGGGGAATGGCAGTACCTGATCCAACACAACCACATGGTCTAAAGCTAG TAATGGAAGACTACCCTTATGCTAGTGATGGACTACTGATATGGTCTGCAATTGAAAATTGGGTTCGTAAATATGTGAACCATTACTACCCAAATTCAAG CAAGATAAGCAATGACAAAGAGTTACAAGCTTGGTACACCGAGTCGATAAATGTGGGCCATGCTGATCTTAGGAATGAAAGTTGGTGGCCGACGCTAAAC ACTAGTGAAGACCTTATCTCCATTCTCAGCATCTTGATTTGGAATGCATCTGCACAACATGCTGCACTTAATTTTGGGCAGTATCCATATGGTGGATTTG TGCCAAATCGTCCGCCGTTAATGAGAAGGTTGATTCCTGAAGAGACTGATCCGGAATATGCTAGTTTCCTAGCAGACCCACAGAAGTATTTCCTTAATGC ATTGCCTAGTGTGTTGCAAGCTTCAAAATATATGGCTGTGGTTGATACACTATCTACTCATTCATCTGATGAGGAATACTTGGGTGAGAGGCAACAACCA TCCATTTGGTCAGGTGATGCTGAGATCATTGAGGCATTCTATGATTTCTCGGCCGAGATTGGGAGGATTGAGAAGGTGATCGATAGCAGGAACTGCAATC GGACACTAAGGAATCGTTGCGGTGCAGGAGTGCTACCTTATGAATTACTTGCTCCTAGTTCTGAACCTGGTGTTACATGCAGAGGTGTTCCAAATAGTGT GTCCATATAAAATTCCAAAACAAATAAGGGAGTGGAATCTCACATTGATGTGTGTTATGGAACAAATGAAAATATTAATGTTAAAGATATTTGCCATATT GTTAACAAAGAGTTGTATAGACTGTATATGTGATTATGTTCTGTTGTATTAGAAACATGTGACTGATTATACAGTAAGTAGTAATTTTCTTATGTACTAT TTGGTGGGTTATTTATTACAAATGAATGAGATTATACTGGTTCAGAAACTCAGAAAAGAGAACATTCAGAGTGGAAACTTCACTTCTGAATTATGCCAGG TAAATTGAGAAAGGCCCTATTTATATTAAACTTCCATGGCTACTTTTTTCCAAATAAAACAGAAAAATATGGACCAAAAAATTATATGAAAGTTGGAAGT TACATCATTCATGAAACAATCATGCTAATTGTAACTCATGGCCCTTGAGTTGGATTTCAGTCATACTCTTCTAGTTAGGCAGAACTTGTTCTACAATCAT GCCATGCATCAAAGCAATGTGAATGGTTTGTAACATCCAAGGTGATAGAGAGACTTCGGTCGTGATTAATAGATTAATCTCGTAGGCATTGTCATTAATC TTTTGCGTTACTCTAAATGAGTGATCGACTCGGGGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_27476; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_207953
| Blastp | Linoleate 13S-lipoxygenase 3-1, chloroplastic from Solanum with 81.6% of identity |
|---|---|
| Blastx | Linoleate 13S-lipoxygenase 3-1, chloroplastic from Solanum with 81.75% of identity |
| Eggnog | Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity)(ENOG410YN4N) |
| Kegg | Link to kegg annotations (102597498) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425679.1) |
| Pfam | Lipoxygenase (PF00305.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |