Ll_transcript_227994

• Id Trinity: FTRINITY_DN52710_c0_g2_i1
• Name Transcript: Ll_transcript_227994
• Sequence: CACGAATGAAGTGTTTGATAGCGAAAAGGGGCAAAAGATAACTATCTCTCTCTTTCACCCAAATTCTCAAACCCTAATCGAATGTACGTTCGATTATGGC GTCGGAGAACGCTTCTCGATCGAATTCCGCTGCTGATTCTTACATTGGCAGCTTGATAAGCTTGACATCAAAGAGCGAGATCAGATACGAAGGTGTTTTG TATAACATCAACACCGAAGAATCCAGTATTGGACTCAGAAACGTGCGATCTTTTGGAACAGAAGGAAGGAAAAAGGATGGTCAACAAATTCCTCCTGGTG ACAAGGTTTATGAGTATATACTGTTTCGTGGATCTGACATCAAGGATTTACAGGTTAAATCTTCACCACCCGCTCAGCCTACTCCACAAGTCAGCCATGA CCCAGCTATTATCCAGTCTCACTATTCTCGCCCAGTCACCACCTCTACAAGTCTGCCTAATGTTGCGAGTGGGCCTTTGGCTGATCTTAGCTCTCATGCC ACACAACTTGGACTCCATGGCTCAAACTTCCAAGGGCCTTTGCCTTTGTATCAACCTGGAGGGAACATAGGGTCATGGGGAGCTTCTCCACCTGCCCCAA ATGCAAATGGTGACGGGCTAGGTATGCCAATGTATTGGCAAGGGTATTATGGTGCTCCAAATGGGCTTCCTAATTTTCACCAACAATCTTTGCTTCGACC ACCTCCTGGTTTATTGATGCCTCCATCTATGCAGCACCCAATGCAGTACCCAAATTTTAGTCTCTCTTTATCATCTGGATCTTCAAATTTACCTGAATTG CCATCATCATTACTACAAGTCAGTAATAGCACCTCTAGTGTCACATCTGCTTCTTTATCACCATCAAATTTGTATCCGGCACCTTCGTCTTTGCCAGAAG CCCCCTCTGCTTTGCCTGTGGCCCCTTCTGTGTTGCTTCCTGCACTTTCTGCTTTGCCCCCGACACCTTCTACTTTATCTCATGCACCTTCTGCATCACT AGCTTTTGAAACTTTTCCCCTGTCATTGACAGATAAGGCTCCAAATGTTTCACTTCCATCAGTCACACCAGCTGCTAACTTGCCATCACTGACTCCTTTG ACCAATTCTGGTTCAGAAATGAATGCTACAGTGCCACCAATCTCCAGTAAACCTAATGCAATTTCAGGTTCAAGCTTGGCATTTCAAACTGTATCTCAGT TGTCCCCTTCAGTTGTTGGATCATCAAATTCTATCAGTACAGAAACACCAGTCCCTTCTCTGGTAACTCCAGGTCAATTATTGCAGCCTGGTTCAACTGT GGTTTCTTCAGTTCACCATTCACAAAC
• Tissue: flowers
• Gene name: LI_gene_27567;
• Additional information: details;

Expression of Ll_transcript_227994

FPKM

• FPAB: 11.6
• FPNAB: 10.4
• LF1: 12.7
• LF2: 7.9
• LF3: 9
• LF4: 10.5
• UF1: 6.5
• UF2: 11.2
• UF3: 13.4
• UF4: 9.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_227994

• Blastp: Protein decapping 5 from Arabidopsis with 54.48% of identity
• Blastx: Protein decapping 5 from Arabidopsis with 69.76% of identity
• Eggnog: LSM14A, SCD6 homolog A (S. cerevisiae)(ENOG41122RA)
• Kegg: Link to kegg annotations (AT1G26110)
• CantataDB: Link to cantataDB annotations (CNT0001887)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461368.1)
• Pfam: Ataxin 2 SM domain (PF14438.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;