| Id Trinity | FTRINITY_DN52710_c0_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_228000 |
| Sequence | ATAGGATAAGAAGGGATGAATAAAGGAAGATTAAAGAGTAAAGTCTGAGAAGTGGAAACTGTTCTGAGGTGTCCTCTTAAGATTGGATTCAACTGAAAGT AAAATAAATTACCCAAAAAAAGTATCAAATATATATTCCATCAGCAAAGGAGAGTATCAGAAACAAAAAAGGGTCAGAAGAGAACTCTCTCTTCCACCAA ATCCCCAAAACCTAAACCCTAATCGATTGCCGGTTTGATCATGGCGTCAGACACCACTTCTAGATCCAATTCCGCTGCTGATTCTTACATTGGTAGCTTA ATAAGCTTGACATCAAAAAGCGAGATCAGATACGAAGGTGTTCTCTACAATATCAACACCGAAGAATCCAGTATTGGGCTTAGAAACGTGCGATCTTTTG GAACAGAAGGAAGGAAAAAGGACGGTCAGCAAATTCCTCCAGGTGACAAGGTTTATGAGTATATACTGTTTCGCGGATCTGACATCAAGGATTTACAGGT AAAATCTTCACCACCTGTTCAGCCTACTCCACAAGTCAACAATGACCCAGCTATTATCCAGTCTCAATATGTTCGCCCAGCCACCACTTCTACCAGTTTG CCTAACATTGCAAGTGGGTCTTTGGCTGATCTTAGTTCTCATGCCACACAAGTTGGACTCCCTGGCTCAAACTTTCAAGGGCCCTTGCCTTTGTATCAAC CTGGAGGGAACATAGGGTCATGGGGAGCTTCTCCACCTGCCCCAAATGCAAATGGTGACGGGCTAGGTATGCCAATGTATTGGCAAGGGTATTATGGTGC TCCAAATGGGCTTCCTAATTTTCACCAACAATCTTTGCTTCGACCACCTCCTGGTTTATTGATGCCTCCATCTATGCAGCACCCAATGCAGTACCCAAAT TTTAGTCTCTCTTTATCATCTGGATCTTCAAATTTACCTGAATTGCCATCATCATTACTACAAGTCAGTAATAGCACCTCTAGTGTCACATCTGCTTCTT TATCACCATCAAATTTGTATCCGGCACCTTCGTCTTTGCCAGAAGCCCCCTCTGCTTTGCCTGTGGCCCCTTCTGTGTTGCTTCCTGCACTTTCTGCTTT GCCCCCGACACCTTCTACTTTATCTCATGCACCTTCTGCATCACTAGCTTTTGAAACTTTTCCCCTGTCATTGACAGATAAGGCTCCAAATGTTTCACTT CCATCAGTCACACCAGCTGCTAACTTGCCATCACTGACTCCTTTGACCAATTCTGGTTCAGAAATGAATGCTACAGTGCCACCAATCTCCAGTAAACCTA ATGCAATTTCAGGTTCAAGCTTGGCATTTCAAACTGTATCTCAGTTGTCCCCTTCAGTTGTTGGATCATCAAATTCTATCAGTACAGAAACACCAGTCCC TTCTCTGGTAACTCCAGGTCAATTATTGCAGCCTGGTTCAACTGTGGTTTCTTCAGTTCACCATTCACAAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_27567; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_228000
| Blastp | Protein decapping 5 from Arabidopsis with 55.21% of identity |
|---|---|
| Blastx | Protein decapping 5 from Arabidopsis with 70.59% of identity |
| Eggnog | LSM14A, SCD6 homolog A (S. cerevisiae)(ENOG41122RA) |
| Kegg | Link to kegg annotations (AT1G26110) |
| CantataDB | Link to cantataDB annotations (CNT0001887) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461367.1) |
| Pfam | Ataxin 2 SM domain (PF14438.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |