Ll_transcript_229275

• Id Trinity: FTRINITY_DN52725_c2_g6_i1
• Name Transcript: Ll_transcript_229275
• Sequence: GGAATATAAAGTCTTGAAATTAGTTTAATGCATCACATCAAAAACTTAACGTGCCATAGTATTCTTGAAAGATGATGAACTCTGCTAAGAAGTTGAGACT TTTGGAGCTCACAGTGCTGTTCTTCCTCTTTTTGAGTTGCTGTTCTACTTGTTCAGCTTGGTTTGGTAGTAGTAGTAATAATAATAAACACAAAAGTAGT TCCAATACAAATCGAAGAAACTCCATTTCTCCACATGAACATGAAGCTACGTCATCATTGTCATCTTCTTCGTTTCTAAACCGTTTCCATGGTCACTCAT CCATCATGTTATCCGTTCATGGCAATGTTTATCCAGTTGGGTTTTATAATGTTACTCTAAGCATAGGGCACCCACCAAGGCCATATTATCTTGATATAGA CACAGGTAGTGACCTCACATGGCTTCAATGTGATGCCCCTTGTTCTCATTGTTCTCAGACACCCCATCCACTTTATAGGCCCAGCAATGACTTAGTGCCT TGCAGGCATCAACTTTGTGCATCTTTGCAGCAGACTGATAACTACCAATGTGAAAATCCAAATCAATGTGACTATGAAGTCGAGTATGTAGATCATTACT CATCCCTTGGTGTGCTTGTCAATGATTACTACCTTCTCAATTTTACTGATGGAAACCGACTTAAAGTTCGTATGACAATGGGATGTGGATATGATCAGGT ATTTCCAGATTCTTCATACCGACCCTTAGATGGAATGCTTGGCCTCGGGCGGGGAAAATCCAGCTTGATATCACAGCTGAGTGGTCAGGGTTTGGTGAGA AATGTAGTTGGACACTGTTTGAGTGTACATGGAGGAGGATATATCTTCTTTGGAAATCTTTATGATTATTCTCAACTGACTTGGACTCCTATGTCATCCA GAGATAATAAACATTACTCAACAGCAGGGGCAGCTGAACTGGTCTTTGGAGGGAAGATAAGTGGTGTTGGAAGCCTTGTTGCTATTTTTGACACTGGGAG TTCATACACTTACTTAAACTCTAAGGCTTACCAAGCACTAATTACCTGGTTGAAAAAAGAATTAGGTGGAAAGCCTATTAAAGAGGTATATGATGACCAA ACTCTCCCTCTATGCTGGCATGGTAAAAGACCTCTCAAAAATATATATGAAGTAAGGAAATACTTTAAGCCCATAGCCCTTAGTTTCACTAGCAGTGGGA AATTTAAAGCTCAGTTTGAAATCCCTCCAGAAGCTTACCTCATAATATCAAACATGGGAAATGTTTGCTTGGGCATTCTTAATGGCTCTGAAGTAGGAAT GGGAGATCTGAACCTTATTGGAGACATATCCATGTTAGACAAAGTGATGGTCTTTGACAATGAAAAGCAGCTAATTGGTTGGGCACCAGCAGACTGTAAT CTGGTTCCGAAATTCAGACATCTCAGCATTTGATCACATAAGAAACTTCATCCTCTGAATTTCTATCTTTGTTGTCATTACATTGTAACTATTGTCCTAT TGTTTATAGATCAGGGTGATTGTTACTAAGCAAGTGCAAATAGCCTTATCTAGTACATCATATATATTGCTTTAGATACATACCTTGATTATTAGTACTG TTTTATGGTGTATTTCTGACACTTCATAGCTCCTACAGTACTTAGTCATATAATCATATTTTGTATCTGAATGTTATATACTCGGAACAAATCATTTTAA AAATCTTTTCAATCATAAAAAATGACCTGTTATTTGAACTAACATATACCATATGAGTTAAAAAGTGATACATGTCATTTTCGTATAGTTAAAGAAGGAT CATTTAGCTGATTTGTATTTTTTTGGTAAGTAAATTTCATTCAATGACTGTAGCAAGAGAATTACTACAGCAAAAAATACAGCAGTTCATCGAACAGTAA CAGCAGAGCAAAAGAGAGTAGGAATAACATAACAAAATGACACTTTTCAGGATTAGTGATACATGCATCTTCTGTTTGCCATCAACAATGATTTACTCGT CAAGGGACTTGACTCTTAATGCATCACCAT
• Tissue: flowers
• Gene name: LI_gene_27638;
• Additional information: details;

Expression of Ll_transcript_229275

FPKM

• FPAB: 5.5
• FPNAB: 12.2
• LF1: 5.3
• LF2: 5.7
• LF3: 2.8
• LF4: 2.1
• UF1: 5.5
• UF2: 6.2
• UF3: 2.4
• UF4: 2.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_229275

• Blastp: Aspartic proteinase Asp1 from Oryza sativa with 43.75% of identity
• Blastx: Aspartic proteinase Asp1 from Oryza sativa with 43.75% of identity
• Eggnog: aspartic(ENOG410XNV7)
• Kegg: Link to kegg annotations (4349962)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417617.1)
• Pfam: Xylanase inhibitor N-terminal (PF14543.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;