| Id Trinity | FTRINITY_DN52734_c1_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_229320 |
| Sequence | TTTTTGTTGGTTTGATAAAGCAACAATTTATGTTTAAATTTTTTGGGTTCGTCGCTTTGCGTTTGGGATCTTCTCCTTAGCCTCGAAGAGAAGGAGAAGG AGAAGGAAAAGGGAGAAGAGAAGTGTTTGTGTGTGAACAAGGAAAGGGTACCCCACACAAAAACATCCCTTCTACTTTTTCCAAATACCATTCATTCCTC GCAACGCAACAACTTTCGATTCTTCTTTTCTTTCGTCAAACCCATTTGGGTTTATCTACCTTCCCTTCTCTTAATCAACTCTTTTATTTTTGACTTTTAC ATCATCGCTTCTTCTTCTACTTTTCCTTCTTTCCAATTACTCATTCTTTTATTTTTTATTTATTTTTAATTCCATCAATTACAAGTGTCAATGATCTAGA AATACACAGAGAAAGAGTCCATCATTGTGTTCTGTTCCCATTTGTTTCAAACATTCTTTATTTCCCATAAAATACACAAAATTGAAATATTCAATTTATG TTGTTCTACTTGTCTATGTCTTTGTCAATTATCAGATCATAAACTTCGCAACACTGATTTTTTAACCGTTTCGTTTCTTTTGATTGGGTCCCGTTCTGTT CTCAGAAGGAGGGAGTTTGTGATCATATAGCACTTAGAGTTATGGGTTGGCTTAGCAAAATTTTTAAAACCTCTGACCATAAGATTTCGGAAGGGCATTA TCATAATAATCATTCAAACTATAAAGACGATGCGGATTCTTACACACCATCAACTTCAGGGGATGTTTGGCCCAAGAGTGAGGATGAAGATATCGATCGT GCTATTGCACTATCTCTTGTAGAAGAAAATCAGAAAGGAAACGGCGTAAATGGTGAGTGTATAGCTCTCACATGTCATTGCATATTCTTGGAAGGGCCAC ATGTATGTCAGTGCATTTTGTTTGAATTTTTACAGTCAGAGGGACAGGTTGCTATGGACAAATGCAATATGGAAAGTTCTAAATTTATACTGTAATACCT TTGTTGTTATTGTTCATGTTTTTCCGAAGTCCTCTTCATCTTCATTTGTAGTTACAATAAAATTGTTAGGAAACTTGTGATCCTATCCTATGAGAATGAT GAAGCCAATTGCTTTCTGTCGAATGTCCTGTTTAAAGGCTGTTGCTAATCTTTTCTTTGCATGCGATGTACCTAGCTTAACATTTTTTACCGTTAGCTTA GAATGATAACTTGATTTTCATTTGCGCAATCATTTCATTATTTACTATTGTCTTGTTTAAAATCATTAAAAATTGATTTGATTTAGTATTATCACCACTA TACTATTATTGTCTTCCAGTTATTACTCTGAAGTATGAAATTTCTGCCTATGTTCTCATTCTCAACAGGTGTTTAACATAAGAACAGTAACCTACCATTT CACCGTTTTTTTAACCCATCGTTTTTAGATTTTTGTACCAGTAAGCATGTCTAACTTGTGTTTTCCTTAAGACCAAATATAATGTTGTTTTACATTAATA AGTTTTTGTCTATTTTATAGACTACAAATCACAATTAGAAGAAGATGAACAACTTGCCCGAGCTATAGAACAAAGCCTTATTGTCGAGTCTCCACCCAGA CCCAGATATGGAAATGAAAATATGCATCAACCGGTTCCATTGTATTTCCCAATGGGGTACAGGGTTTGTGCTGGCTGCAATACCGAGATTGGTTATGGAC GATATTTAAATTGTTTGAATACATTCTGGCATCCTGAATGTTTCCGTTGCCGTGCCTGCAACTTACCAATCTCTGATTATGAGTTTTCCACATCTGGCAA TTACCCTTACCATAAATCATGCTACAAGGAAAGCTACCATCCAAAATGTGATGTCTGCAAGCACTTTATTCCGACAAATCATGCTGGTCTTATTGAATAT AGGGCACATCCATTTTGGATCCAGAAATATTGCCCTACCCACGAACATGATAATACCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_27673; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_229320
| Blastp | Protein DA1 from Arabidopsis with 40% of identity |
|---|---|
| Blastx | Protein DA1 from Arabidopsis with 57.23% of identity |
| Eggnog | PDZ and LIM domain(ENOG410XRD4) |
| Kegg | Link to kegg annotations (AT1G19270) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458701.1) |
| Pfam | Ubiquitin interaction motif (PF02809.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |