Id Trinity | FTRINITY_DN52734_c1_g1_i13 |
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Name Transcript | Ll_transcript_229324 |
Sequence | TGCACTCTTCAGACTAAAATTGGATGTATATTAGGATGGAATTCTTCCTTCCAGCTTAGGATTTTTTCAGTGTATGCTTTTGTACCTTTTATTTATTGAA AGCCAATCCCACCTAGTGGGACTAAGACTTGGTTGTTGTTGTTGTATTCAATTGGGGTTGTCTCAATATACTTATGTTTTATGCTATCCGCTGTATATAT GAAGGTTATCAGACTCTAAGTCAAGATGTTGAAGAAGGTATCTGTCAGGTTTTGGCTCATATGTGGTTGGAGTCTGAGCTCTCTTCTGCATCCGGAAGCA ACCTTTTATCAGCTTCGTCCTCGTCTGCATCGTATGCTTCGAGAAAAGGTAAAAGTCCTGCTTTTGAAAGGAAGCTTGGGGAGTTCTTCATGCACCAGAT TGAATCTGATATTTCCCCAGTTTATGGAGATGGATTTAGGGCAGGTCAAATAGCAGTGCGTAAATATGGTTTACAAAAGACCCTTAACCATATCTGGATG ACGGGTACTTTTCCATTTTGAAATATAGAGATTGTTCCTCATTCTTTCTAGAGATTAAGCTAAAGCTACTTAGGTATTATTAGCTTTGAAAAAGTGTGGA GTTTTTGTACTTATAATTAATTGATACACTTGTGGATGTATTTATTACATTCATTTGGTCTTTTTAATCTTGTTTAATTGCAACAAAAAAACATAAAAAA GAAAACGAAACACCTTCCTACCAATATTAGCTAATTACTTCTGTGTTTCAATAGAAACCAAACCAGAGCATG BLAST |
Tissue | flowers |
Gene name | LI_gene_27673; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_229324
Blastp | Protein DA1 from Arabidopsis with 67.62% of identity |
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Blastx | Protein DA1 from Arabidopsis with 64.76% of identity |
Eggnog | PDZ and LIM domain(ENOG410XRD4) |
Kegg | Link to kegg annotations (AT1G19270) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458702.1) |
Pfam | Protein DA1 (PF12315.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |