| Id Trinity | FTRINITY_DN52736_c3_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_228220 |
| Sequence | GTGAACCCTACAATATCTCCACCATCCTTCCGCCGTCGAAACCCATCTTCCTCTGCTTCCGCCGTGAAATCGAAATGTTGATGAGCCAAATTGGTTTCGG TGTGAAGTTTGGGAATTGGAGATGCTACGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAAAGTGAAGTTGCTGTTGTTGAAGGTGGTAATGGCAGA ATCTCAGAACGCCAACATATCCGTCTCGGTTTACCTAGCAAAGGTCGCATGGCCACTGACACCACCGACCTCCTCAAAAATTGTCAGTTATCTGTTAAAC AAGTCAATCCTAGACAGTATGTTGCTCAAATTCCTGAGCTCTCCAATTTTGAAGTATGGTTTCAGAGACCAAAAGATATTGTAAAAAAATTGGGATCTGG TGATCTTGACCTTGGTATTGTTGGTCTTGATACTTTCACTGAACATGGGCAGGGGAATGAAGATCTTATCATTGTTCATGAAGCTTTGGCCTATGGTGAT TGTCGTTTATCACTTGCGATTCCTCAATATGGAATATTTGAAAATATAAATTCACTGGAGGAGCTAGCTAAGATGCCTCAATGGACAGAATCAAAACCTT TGCGAGTTGCTACTGGATTCACCTATTTGGGTCCTAAATTTATGAAAGACAACGGTCTTAAGCACGTGACATTTTCAACTGCTGACGGAGCTCTGGAGGC AGCTCCTGCGATGGGGATAGCCGATGCTATCTTGGACCTTGTGAGTAGTGGTACCACACTAAGAGAAAACAACTTGAAGGAAATTGAAGGCGGAACTGTG TTGGAAAGCCAGGCTGTTCTTGTTGCAAGCAGGAAATCATTGGTCCAACGTAAAGGAGTACTAGACACAACACATGAGATTCTTGAAAGATTGGAGGCAC ATCTGAGGGCCATAGGGCAGTTCACGGTTACTGCAAACATGAGGGGAAGGAGTGATAAGGAAGTGGCTGAGAGAGTAGTGAGTCATCCATCATTATGTGG GTTGCAGGGACCCACTGTCAGTCCTGTTTTCGGCCCAGATGGGGAAGTAAAACACTACGCCATAGTCATATGTGTGCCCAAGAAGGCGTTATACAAGTCT ATGAAACAACTCAGAGCGGTGAGTTTTTAAAATAATTGAAGCTGTTTAAATGTTTTTCTTGTTAAGCCTATATTTCTAAATGATTTTGATGGATGAGGGA AAGAAAAATTCTGGGTAGATTACAGTGTTTAACATCAGTACAATCACAGGATTTAACATCAATATACATTGAGTGTATTATTCACCATTTTGGGCATTGC TTCTATTCAAGAGACAATGAATGCTAAATGGTGCGCTAACAGTTTAAAAAAGTTACACCGTTGGTGCAAAAATTATTTTGTCTAGATTAAATATGAAAGA TATAGTTTATCTTTTGCCTGCATTGTAAAATGATGCCACTATTTTTGTTTTGTTTTTTAGGCTCATTCTTATAGGAGAATATAAAAATACCACCTTTAAA TTTATGTTCTCATATTGCTATTATTTAATTTTATTTGACACACACACATATATTGTTTTGTCAATGATTATGATTTATGGTAGAATATTATAATATTGTT CATCTTTGTAGTCGACCCCTTCGGGTGAGATTAAGGTTTGATTCTATATTAGTGTGTCCCTGTGTCCTATATTTTGGGTATTGTGGATGTTCATAAATTG TGTCCTATATTTTGGGTATTGTGGATGTTCATAAATTGTGTCCTGTCAAATATTCTCTTTGAATATTGCCTGCTATTTGTTTGTTCTTCATCTATGGTTC CCATACTTGGTTTCACTCTTTTACTACATTCATATGATGCAGATTGGAGGCAGTGGAGTTCTTGTATCACCCTTGACCTATATTTTTGATGAGGAAACTC CAAGATGGCGTAGACTCCTTTCTACTCTTGGGATGTAAAATATTCCATAATATTTATTATTGTATTTTGGTATTGGCCTATAAATAGGACCAATCTTTTG TACTTTTGTATTAACTTCACGTCTATCGGAATAATATTAGTCGGTGTAAGGAGTTGGTCTAGGGATGCAAGACTTTGTTGGATTCCCAAGTATCTAGCAA TCAATACTTGTTGGATGAGACAATAACATACCAAGTTTAATAAGAATGGTGATTAGATAATATGGGATACATGCTTTGGTGCATGATACTCTATGTGGTT CTTCAATTTTTACATGTTATAAGACTTTCTTTTACGAGGGTATGGCTACTATAGTCATGATTCACAGTGATTCATGTGCCCATTTTTATAGAACATAAAA ATGTTAGTTGACCTTTTACTTGAAATACTTCTCAACCGTGATTAGTGTAACTAAAAAATGAAAGACTTTGAAAACATGAAATATATTAGCTATATGATTC TC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_27684; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_228220
| Blastp | ATP phosphoribosyltransferase 2, chloroplastic from Arabidopsis with 75.22% of identity |
|---|---|
| Blastx | ATP phosphoribosyltransferase 2, chloroplastic from Arabidopsis with 77.88% of identity |
| Eggnog | Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity (By similarity)(COG0040) |
| Kegg | Link to kegg annotations (AT1G09795) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443309.1) |
| Pfam | ATP phosphoribosyltransferase (PF01634.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |