| Id Trinity | FTRINITY_DN52739_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_227814 |
| Sequence | CTGGGCTAGATGTGTGAGCTGAACAACGATGGTGGCCCATTTTCATAGGAATCAGAAAGAACAACAACAATAATGGTGAATCAGTGATAGATGGTGAATC TGAAACCAAGGTAGTGATTTCATTTGACAGATCGTAGAAGAAGAAGAAAAAATGGTGGCAGATGAAGTCCCAGTGGACGATAAAGCAAAGAGAATGAGAG ATCTTCTATCGAGTTTCTACTCTCCAGATCCTTCAATTTCCTCCAATTCCATCACCAATCCTTCCAAACACGATGATATCAACTCTGATTCCTTCGATCC CGATCATTACATGAATATACTTGCACATAAGTCCAATTTGGAAGGGTTACTCCAACGGCATGTTGAAATGGCTGCTGAGATTAAGAATCTGGACACTGAT TTGCAAATGCTTGTTTATGAAAATTACAACAAGTTCATCAGTGCCACTGATACTATCAAGAGGATGAAAAGTAACATTTCGGGGATGGAGACTAATATGG AGCAGCTTCTTGAGAAGATAGTGTCTGTGCAGTCAAGGAGTGACAGTGTTAACACTTCTCTTTTTGACAAAAGGGAGCATATAGAGAAACTGCACCGCAC CTGCAATCTTCTTCGTAAAGTTCAGTTTATATATGACCTTCCTGATAGACTTGGCAAGTGCATCAAATCAGAGGCCTATGCTGATGCAGTCAGGTTTTAC ACTGGAGCGATGCCAATTTTTAAGGCCTATGGAAATTCATCGTTCCAGGATTGTAAGCGAGCATCTGAAGAAGCAATAGCTACCATAATAAAAAACTTGC AGGGGAAGCTATTTTCAGACTCTGAATCAATACAAGCGAGAGCCGAAGCTGCAGTGCTCCTAAAGCGGCTGGATTTTCCGGTGGATAACTTGAAGGCAAG GTTACTTGAGAAGTTAGAACAATCTCTTACAGATATTAAGCTGAAACCTGCAGAAATAAACAACCCTTCAGTGGACCTTTCTCCTTCAGTATCTGCTCAT AAGGCAGCTGTTCATGAATTTACCGAGGCAGTTCGTGCTTTTCGAGCAATATTTCCTGATTCAAAAGGGCAGTTGGTTAAACTTGCTCACGACTTGATTA CCAATAACTTCGTAATTGCTGAAGAATATGTAAAGACACGGATTTGCGCAGATGATCTACTTGGCGTTCTTAGAGTTATCTGGGATGATGTACTCCTTAT AGATGAAGTGTTACAGGAAGCAGCTCTCTCTAGCAATTCCTTTGAGGTTATACATCAAACTTTTAAGCTCAAGTTTGAGACTGACCTAAGCTCTAGTTTT TCACTCTTTTGTTCCTCTTTCTCCGTTTTTGTTTAAGAATCTGGTCATTATGAAGTTCATATTTTAAAAATGGATTTTCATCAGTTAACCCTAAATATTT ACAGTCTGCCAAGGTTGTTGTGACACTGTATGTTAGAAGTGCATTTTCTCATCTTCTGCAAGACATCTCAGGTTAGTTCTATGATTTCATGTTTGCAAAG CTTCTGATTTTTGTTTTCAACTTGAAGCTTGAAATAAATTTTCTGCCACACTATAGGAGTATCAAGAAATTTAAAATCTTAGACAGTTGGTTTGTGCCGA GATGACTGTTTGTTTATGAAAAAGACCAAAAGCACAAAATGCAATAGATTATGTTGTCACCACTCACCAGTTCTCCCCTGTTAAGATGCTTGATTTTTTT AATAAATATTGAATGATTTGAACTGATAGAAAACTATCTTAGTAACTACACTCTGAGTTAGCTTTTGTTTGATAGATTCCCTCTTAAAAATCCTGATAAA GGATGGAGGAGAGGAGTGCTCTCTTGAAGTGGTTCTTGATGCTAGCAAAAAAGGAGTTCTAAAAGGAGGCATGGATGTCTTACTGGTAAAAACATTTGTC TACTTAGATTCCTAGGTATAAGGTTATGTGGATGCATGTATGTGCATATAACGCCATTACCAAGATTTCTGTTTTATGTTGTTTCATTTACATTTAATCT CTCTCCTTCAGGACTTCCGCAAAATTTTAGATCATGGCTCTGGGATCCTAGTTAGACTAAGAGAGACAATCACTGATTGGGTTCAAGAAGGATTTCAAAA CTTTTTTAGGCAACTTGAGGATCAATTCCTTCAGTTTTCAGGAAAAAATAAATCGTCATCTATTATAGATCATGATTTGGCAGAGGGAGCTCAAGGTGAC AAAGCTTTTGCTGGCCTTGTCCTAGTGCTGGCACAATTGTCTGCTTTTATTGAACAAACTGTCATCCCAAAAATCACCGAGGAAATAGCTGCTTCCTTTT CTGGTGGCAGCGTTAGAGGCTATGATTATGGACCTGCCTTTGTTCCTGGTGAAATCTGTCGGAAATTTCGGTCAGCTGGTGAAAAATTCCTGCACCTGTA CATAAATACGAGAAATCAGAGGATATCACTTCTTTTGAAGAAGCGGTTTACCACACCTAATTGGGTTAAGCATAAGGAGCCAAGAGAAGTTCATATGTTT GTCGATTTATTTCTTCAAGAGCTTGAGGTTATAGGTAATGAAGTTAAACAGATTTTGCCTGAAGGCATACGTAAGCACCGCAGGACTGATAGTGATGGAA GTAGTGCTTCATCAAGGAGCAACCCCTTACGGGAGGAGAAATTGGGTAGGTCAAATACAAGGGGAAGGAGCCAACTTCTGGAAACACATCTAGCAAAACT GTTCAAACAGAAAATTGAAATTTTCACAAAAGTTGAATATACTCAGGGGTCTGTTGTCACAACCATAGTGAAATTGTGCCTTAAAAGCTTACAAGAATTT GCGCGACTCCATACTTTTAACCGGAGTGGATTCCAGCAAATTCAACTGGATATTCAGTTCCTAAGAATCCCTTTGAGGGAAACAGTTGAAGATGAAGCTG CAATCGACTTCTTGCTCGATGAGGTGATTGTTGCTACTGCAGAGCGCTGCCTTGATCCAATTCCATTGGAGCCTCCCATACTAGACAAACTTATACAAAT AAAGTTGGCTAAAACCAAGGAACAAACTACAATCTCTTGATAAAGATTTTATGGAAGTGAAGGCTTCAATCTTGAAGACCTTTTTTTATCTGTTGAAGAG ACAGTATTTTCCTTGTGCGTGCTGTATTATACTTTCAATGTTGATAATGTAAGGAAGAGCTGAAGAGAAGGATGCGTTTGTTGTATTTTCTAAAAGTTGC TATCACCTGTAGAACAAGTTAAGTTTTTACAGTAAGGCCGGTTCTTGTTGACTTTGTATATCTCTTGTAACATGTCACATTGCTATTTGTGGAAGTATTG AAACACGTGTTCGTGACACTATCCATTTGCACGAGACTCCCACCAAGTAGAGTTTCGGGATAATAGATGTATGTAATCTTATTATAGACACAGACAAATA ATCATATTGTTGTACACCTAATAAAAGTGCCAAACATGGATCCCAAGCTATTAACTATATAAACGAATCTTTTTTATGTGATG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_27718; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_227814
| Blastp | Vacuolar protein sorting-associated protein 51 homolog from Arabidopsis with 67.54% of identity |
|---|---|
| Blastx | Vacuolar protein sorting-associated protein 51 homolog from Arabidopsis with 67.54% of identity |
| Eggnog | vacuolar protein sorting 51 homolog (S. cerevisiae)(ENOG410XPIF) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441303.1) |
| Pfam | COG (conserved oligomeric Golgi) complex component, COG2 (PF06148.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |