| Id Trinity | FTRINITY_DN52750_c0_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_228458 |
| Sequence | GTTAGAGCCGATTAAGAAATTGATTTTATAATTTATAATAATATAATATAATATTAAATTAGTAAGAGCTTTGTTGACAAAGATATAAAGCAAGTAGCGA TGTCAAGGCCCATTATAGAGGAGGTTAGATGATAGGCCCAAAATATGGCCCATAAATAAAGCCCTAAATGAGGGTCGAGAAGTGCATTATAAAACATATA GAAAGCAGAATTAGGGTTTCCTGCAAGAAAGGCTGAAAGTGTGTGCGCAGATTTTTCTATTGTTGCAGCCTCAACCTTTTCAATCATGATCATTTCCGAG AAGAACCGTAGGGAGATCAGCAAATACCTCTTCCAAGAGGGAGTTTTGTATGCTAAGAAGGACTTCAATCTGGCGAAGCACCCGGAAATAGATGTGCCAA ATCTGCAAGTTATTAAGCTGATGCAGAGTTTCAAATCGAAGGAGTATGTGAGAGAGACATTTGCCTGGATGCACTATTACTGGTTCCTCACCAATGATGG CATTGAGTTCCTTAGGACTTACCTCAATCTTCCTTCAGAGATTGTCCCTGCCACTCTTAAGAAACAGGCTAAGCCAGCTGGAAGACCCTTCGGAGGTCCA CCTGGTGATCGCCCTAGGGGCCCACCACGCTTTGAAGGAGAAAGGAGATTTGGGGGTGACCGTGATGGATATCGTGGAGGTCCCCGAGCACCCGGTGGTG AATTTGGAGGAGAAAAGAGTGGAGCTCCTGCTGACTACAGGCCATCTTTCGGGGTATTGTTACTACACTTTATATTTATGTCATTATAGTATTATTATGT TGTTTTTACAAGATTATGCTTCATTACATTGTTAGACCATGATTGTAGTTTGCTCTGCTATTTGTTGTGGCCTAGTTTTAAGTCAATTTCTGTTGCCCTT AATCTGATTGTCTTGTTTATCGAATCTTTTTTCTTATGCCTAGTTCCTCTCTTATTTGATTAATTTTATTGATACAAAATACATATAAGTTGTGTTGTCG TAGAGCTTATGAGATTGTTAGACCATTGACACTCTGAATTATCCATTCAATCTCTTAAAAACCAATGCTACTTATTATTTTACAAAATTTTGAATAGTCA GTAAGTAGTGTGAATGATTATTTGGTAGTGCCAACTGCATCATCACCCAAAGGGTATCTATTATATGCATATTGGAGCTTTCAAATGAAATGATGCACAA TGTTTTCTTGTTGACCAAACCATGTTGAGTGGGACACTGATGCCTAATCTGTTATTTTTTTGTTTCTGTTCTCATAGTTTAGTTTTGTAGTTTCATGTTC TGTTTGGAGTGGCACCATTTATGTATGTTTTATGAGGAAGTTATTGATTAGGTTCTAACATCTATCGTCCGCACTGTCTGTAACCTTTTCTTGATGCTAG TTCTTTTGTGGAGCGAGTTCCTTTTGTAGTTTCCTTAATCTGTTTGTGGGCTTTTACATTATTGTTGTGCAGGGTCCTGGTGGACGGTCTGGCTTTGGCC GTGGTGCAGGTGGTTATGGAGCACCATCTAATACAAATGCTTAAAATGTATTAATTTATGCTCCAGTTTTTGCAGTTTTAGTTTTTTCTGGCCGTCATTG GAGTCAATATTATTTCCCTTTTCCCAAATGTTGTTTTTATCGACTTTGCAAGTATTTTACTTTAAGATTCAGTGATTCATGTAATGAAGTTTTTGTTTTG AGTACTTTTTCTAAGTTGATTGACAATCTTGGTCTTAAGAGATGCGGAATGGTTTTCGTATAGTTAAATATACCCTTGACCGAATGTTTTTGGTTGGATA CCCTTGACCTAATGATTTGCTAGATGATTTTATATAGAAGTGAAATCATTAAAGAATCATTGATGTATCTCATGTAACTCGGAATGCTAATAGTGTTAAA CTTGATAAATATTTAATCTCCTAATATTATTCAATCTTGGGGTGAATGTATCCCGTTAGTCATAATATTCGCCATATTTCATTAATCAAGAATTGGGTAA CGCTAATGATCATATAATATTTCTACCTTATTCGCGATCAAGAATTAACACCAAATATCGCCGACCGATAATTCATGGTAAATAGGTTAATTGTGCCCAG TAAATGTTTTTTTATGGGGATCCCAGTAATGTCCTTCTGGTCGGAACTGTTGCCTTAAAATTTTGGATTGTGAATTATATTGGTTGCTCCCGGAAGCTTT TGAAGTTCGAACGATATAATACACTATTATCTTTTGAAGCTGTTGCCTTGAAATCTCATCCTAAATGATAAATGCAGACGAATTGATATGCTCGCTTCTT CCTGTATGAATAAGTTGGTATTCGTATCACTTCTCTTTTACAAAACAATTAATTTACAAATGCAGTGGATAGAAACCATCATCAATCATTACGCTGAATT TTTTTCCATTTTATATTTAAATACCTAATCCCAATATTTTCTGATATTAATATATTACTTGTTAGTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_27813; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_228458
| Blastp | 40S ribosomal protein S10-2 from Oryza sativa with 81.41% of identity |
|---|---|
| Blastx | 40S ribosomal protein S10-1 from Arabidopsis with 88.54% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (4329619) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424423.1) |
| Pfam | Plectin/S10 domain (PF03501.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |