Id Trinity | FTRINITY_DN52750_c0_g1_i7 |
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Name Transcript | Ll_transcript_228448 |
Sequence | CGAAGAGATAAAAGGGTGCGAGAGAGTGTTATCGCTGAGTTCTTTTTCGTTGCCTCCTCCACCTTCGCAATCATGATCATTTCCGAGAAGAACCGTAAGG AGATCTCCAAATACCTCTTTCAAGAGGGAGTTTTATATGCAAAGAAGGACTTCAATTTGGCGAAGCACCCGGAGATAGATGTGCCAAATCTGCAGGTGAT TAAGTTGATGCAGAGTTTCAAGTCAAAGGAGTATGTGAGGGAGACATTTGCTTGGATGCACTATTACTGGTTCCTCACCAACGATGGTATCGAGTTCCTT AGGACTTACCTCAACCTCCCTTCTGAGATTGTCCCTGCCACTCTTAAGAAGCAGGCCAAGCCAGCTGGCAGACCCTTTGGTGGCCCTCCTGGTGATCGCC CTAGAGGCCCACCACGCTTTGATGGAGAAAGGAGATTTGGTGGTGACCGTGATGGATACCGTGGGGGTCCCCGAGCACCTACTGGTGACTTTGGAGGAGA GAAGGGTGGAGCTCCTGCTGACTACCGGCCTTCTTTTGGGGGTCCTCCTGGTGGAAGGTCTGGGTTCGGTCGTGGTGCTGGTGGCTATGGAGCACCACCT CCTTCAAATGCTTAAATGTAATACTTTATGCTCCAGTTGTTGCGGTGTTAGTTATTCTGGCTGCCACTGGAGTCAATATATTTCCCTCCCCCAAAGGTTG TTATGAGTTTGACATTTAAGTATTTTAGTATTCGGTTATTTATGCAATCAAGATTTTTGGATTCTTGTATCAATTTACTCAATTTTCGGTCATATTCTAA TGTTTTATTCAATCCTAGACATTTTAGGGATAAGGTGATTTTGTATTTGATGTTCTATTTTACAGCACTCTAGATCTGTAATGAGCTTTCTTTGGTCTAA TCACTTTTTTAAGAACCATGATATTAATACCCTGTAGAGTAGAGCGGTATTGTTTTAGTGGACCGGAGTTTATTAATCTTTTAATTCATTAAATGCTTTC CCTAGGATGATATTCAATTATGTTCCTACTTTCTTACCTTTGTGATAATGGTCTCAGGATCCAGGTTTTATATTGTACCCTTTGATTTGTTTTTCTTGTC AAC BLAST |
Tissue | flowers |
Gene name | LI_gene_27813; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_228448
Blastp | 40S ribosomal protein S10-2 from Oryza sativa with 82.05% of identity |
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Blastx | 40S ribosomal protein S10-3 from Arabidopsis with 89.58% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (4329619) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421657.1) |
Pfam | Plectin/S10 domain (PF03501.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |