Ll_transcript_228136

• Id Trinity: FTRINITY_DN52757_c0_g1_i6
• Name Transcript: Ll_transcript_228136
• Sequence: ATCGAAACATGGCTATGGCGGAAAAGAAAGAAATAGCAAAACCCTAATTTGTTGAGAAGAGAAGAATGAGGAAATGGAAGATAATCTCCGACGCCGATAA CAACAATTACCACTGGCACAACACTCACCACCACCACGATGATGATGAACAACAATCACCATTCAATTCCATTTCTACTGATTCTACTCCTCTTCTTCCT TCAATGTCTGATCTTCTTCTTCAAGCATGTTCTTCTTCAATTCAACACCAACAACAACAACAAGAACATCAACCTATTGTCATGTTTCGAACCGCTCTCG GAAAACCGGTTCAACCGGCTCAGTCTTCACTCGCCAAGGCTTTACTTCTACTTGGCGAAGATGCGAACGCTAATGCTAATTCAGCCGCTCAAGGTGAAGA ACACCACATAGATAATATTTGCAGTTTCTCCAATTCTCTTTTTAAGACAGGCTCTGGAAAAAGTGTTACTATATCTCCTAATGGTCTGGTTAGAGCAAAG ACTTTACTGGGATTGGAAGAACATGCTGATGGTAGTAATACTCAAACCCTTCAGCATGCAAAAAAATGGCATACTGTCGGTGAAACATATGAAAGGCGGA ACTCACCTCATTTTCAGCTACATAAATCTGTTAACAGTAATAGGGCGATGAATGCTGCATCATGTCAAAATCATTCACTTGGTAGTAGTCATACATCAAA GAATGACTTCGAAAAAGAAGTTGGTCAACCAAGTATGTGTACTTCTGGTGGTAAACAACCTCCAATTAAGTTCCACACTGCAGGTGGAAGGTCTATATCT GTTTCTAATGATGCACTGCAACGTGCTAGAAGCCTTCTTGGTGACCCAGACCTTGGAGATTTCTTTGATGGAGGGGATGCCGGTGACTCAATGTTCTCTT TACCAAATCAGAAACAAACCAACACTAGTTCATCTTGTGACAGAAGTGATTATGATACTCCTTTGGTTGATCAAGTAACACTAGAGAGCAATCTTATGAC AAAATGTTTCACATCACCCTTGTCATCTTATAGACAAAAGGACACCAAGTTCCTTCATGAAGGAACTGCAAATAACTTAATCAAAAAATTTGATGCTGTT GGGAGTGAAAATAATCACAGCCTGAAAAGTAGCATCGCCTCTGGACGGAAACCCCTACATGACATAAACCAAGTAACAGACTCAACTGCATATCATTCTT CGTTGAATGGGTTTTCTTCAAAAGTAGATCCACTTAGAATGTTATCAGGAAGGTCATTGGCTGATATTTCCAATACCATTAACACTGTGCATACAAACAA TAGACAACAACCTGCTAGTGGAAAACGAAGACTAGGACCACATGCAATGGTTTCTCCCTTTAAAAAGCCTCGTGGCTGCAATTCTTCCATCCATTCTGAC AACAACGTTGGAGTTTTTTCTAATGGTTTGTGGTCTTCAGGTTTTTCTCAATTTTCTGGGGATGCTTCCGTAAGCAAAATAAAGGTTTCTACCTTGTATC CATTTCAGCACCCAAGGATGCACATGAAACATTTTTTTGCAGTGCCTTCATTAGATCAAAAAGTGCAATTTCCAAACCTGGTCAGACAGATGACATCAGG TAATGCAGAAAAATATGTGTTCCATGAGGGGTCTGGTGAAGGTGGTATCGGAGCAGAGGCTTTTGTCAATCTTTTGGTACAGCATGGTGCTTCCACACAT TTTGCTTCTAAAGAGTGGGTCTTGAATCATTACAAATGGATTGTTTGGAAGCTGGCATGCTATGTGAGATGCTGTTCAGCTAGGTCTGCTGGAAATTTTT TGACTATATCAAATGTACTTGAGGAACTGAAGTACAGATATGAAAGAGAAGTGAACCATGGTCACCGATCGACCCTAAAGAAAATTCTTGAAGGGGATGC ATTACCTTCTTCAATGATGGTTCTATGCATTTCTAGCATTCACTCTAATCATGGACTGGAAAATGGGACTTCTTCTGAGACAGAGACTGGGACTCAGAGC AGTGAGTCAGTAATAGTCGAACTAACTGATGGATGGTATTCTATGAATGCCATGTTAGATGTTCCGTTGTCAGAGCAACTAGCTTCTGGAAAATTGTTTG TAGGACAGAAGCTTCGGATCTGGGGAGCAGGATTATGTGGCTGGCATGGGCCAGTTTCACCCCTTGAGGTGTCATCAGCAGTTAGTTTAATGCTGCACAT AAATGGAACATATAGAGCTCATTGGGCAGACCGGTTAGGATTTTGTAAGGTAGCTGGTCCACCTTTGGCCTTCAGATGCATAAAAGGCAATGGTGGTCTA ATCCCTCAAACTTTGGCTGGAGTTACTCGCATATATCCTATTCTTTACAAGGAAAGGTTAAGCTGTGGAAGGTCTGTTGTCATATCAGAGAGAATGGAGG ATAAAATGACGGAGCTATATAATCAGAGATGCTCTGCTGTTGTAGAAGGCATCATTTCGGATTATCAGAAGGAAAGAAGAGGTTCACGTATTGATGAAAG TGACAGTGAAGGAGCTAAGATTTATAAAATGCTGGAAGCAGCTGAAGAACCTGAGTTCCTAATGGCAGATATGAGTCCAGAGCAGCTTAGTTCTTTTTCT GCATATAAGGCCAAATTAAATGCAATCAAACATTCTGAAATGGAAAAAACAATTGAGAAAGCTTTGAAAGATGCTGGCTTAAGAAACAGAGAAGTCACAC CATTTATGAGGTTGCGGGTTGTTGGATTAACTCACAAAACTCGACAAGACCGGCCGAAAGAGGGCATAGTAACAATTTGGAACCCAACAGAGAAGCAGCG GCAGGAGTTGGTAGAGGGAGAAGCATATGTAATCGCAGGTCTCATACCATCAGGTGTTGATTTAGACATCCTTCACTTGCAGACTAGAGGATCTTCCACC CAGTGGTTGCCTTTATCTTCTGATGCAAAAGAACAGTTTAAGCCTTTTTTCAGTAATCGAAAATCGTTCTCAATGTCAAGCTTGAGTGACATCCCTCTTT CCAGTGAGTTTGATATTGCTGCACATGTTGTGCATGTGGGAGAGGTTTATTTGTCAAGTCAGCAAAAAAAACAATGGGTTTTCGTGACTGATGGATCCAT TATGCATGGTTTACAATCAGAAACAATCTCTTTGCTTGCCATTTGCTTTTGCTCTCCATCAATTGATTATGATTCATTACCATTGATTAACTATAATCTT GCTGGATCTACGGTTGGTTTCTGTAATCTTATTAAAAGAGAAAAGGACAAAACAAACCATATCTGGGTTGCTGATGCTACCGAAAACTCGACCTATTGTT TGAGTTACGATTCCCTGCACCATGCTCACCTCAGAAACACCGCCAGCTCCATCAGAAGATGGGCAAACAACTCTAGCTTGACAATAGAGAAACTCAAGGA AAAAGTGTTGTCTATGGTTGGTGATTGTAAAGGATAACTAAGATGGGCCTAAATTGCTATTTTGCCATTGGTCTTGATTTGCATATGGAAGGGTATTCAC TTAACCCATGCTCTTACCATTAATGTCATATTAAGGTAATGGTTTTAAATCTCTTAATTTAATGAAGAGATATAGTTAGTTATACTTTCTTACATTAACT CAGTATAGTCATAGCAAAATGTGATTGTACCCAATTATGATATTTTTTGCTTTGTAATATAATCACAATGGAATGAATTGATGAGTGATCTATGACAAAA TTTGAAGGTTATATCTGAAAAATTAAAGCTTGTAGTGGATTGATTGAGCAAGCAAAATGCTAACCCACACATTCTTGGCCTAACATTATGACAGTTTTGT TGATTTGTCCTAACTTAACAAATAAAATAATACTATCTGTGTAAAGATTTATACATAGTTACTATATCATTTGTATTACTTTTATTTAAGAGTCAATAGT TA
• Tissue: flowers
• Gene name: LI_gene_27870;
• Additional information: details;

Expression of Ll_transcript_228136

FPKM

• FPAB: 0.8
• FPNAB: 1
• LF1: 1.3
• LF2: 0.3
• LF3: 0.8
• LF4: 1.2
• UF1: 0.8
• UF2: 1.8
• UF3: 0.6
• UF4: 0.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_228136

• Blastp: Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B from Arabidopsis with 44.34% of identity
• Blastx: Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B from Arabidopsis with 44.1% of identity
• Eggnog: Breast cancer 2, early onset(ENOG410Y06W)
• Kegg: Link to kegg annotations (AT5G01630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438733.1)
• Pfam: BRCA2 repeat (PF00634.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;