| Id Trinity | FTRINITY_DN52757_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_228139 |
| Sequence | ATCGAAACATGGCTATGGCGGAAAAGAAAGAAATAGCAAAACCCTAATTTGTTGAGAAGAGAAGAATGAGGAAATGGAAGATAATCTCCGACGCCGATAA CAACAATTACCACTGGCACAACACTCACCACCACCACGATGATGATGAACAACAATCACCATTCAATTCCATTTCTACTGATTCTACTCCTCTTCTTCCT TCAATGTCTGATCTTCTTCTTCAAGCATGTTCTTCTTCAATTCAACACCAACAACAACAACAAGAACATCAACCTATTGTCATGTTTCGAACCGCTCTCG GAAAACCGGTTCAACCGGCTCAGTCTTCACTCGCCAAGGCTTTACTTCTACTTGGCGAAGATGCGAACGCTAATGCTAATTCAGCCGCTCAAGGTGAAGA ACACCACATAGATAATATTTGCAGTTTCTCCAATTCTCTTTTTAAGACAGGCTCTGGAAAAAGTGTTACTATATCTCCTAATGGTCTGGTTAGAGCAAAG ACTTTACTGGGATTGGAAGAACATGCTGATGGTAGTAATACTCAAACCCTTCAGCATGCAAAAAAATGGCATACTGTCGGTGAAACATATGAAAGGCGGA ACTCACCTCATTTTCAGCTACATAAATCTGTTAACAGTAATAGGGCGATGAATGCTGCATCATGTCAAAATCATTCACTTGGTAGTAGTCATACATCAAA GAATGACTTCGAAAAAGAAGTTGGTCAACCAAGTATGTGTACTTCTGGTGGTAAACAACCTCCAATTAAGTTCCACACTGCAGGTGGAAGGTCTATATCT GTTTCTAATGATGCACTGCAACGTGCTAGAAGCCTTCTTGGTGACCCAGACCTTGGAGATTTCTTTGATGGAGGGGATGCCGGTGACTCAATGTTCTCTT TACCAAATCAGAAACAAACCAACACTAGTTCATCTTGTGACAGAAGTGATTATGATACTCCTTTGGTTGATCAAGTAACACTAGAGAGCAATCTTATGAC AAAATGTTTCACATCACCCTTGTCATCTTATAGACAAAAGGACACCAAGTTCCTTCATGAAGGAACTGCAAATAACTTAATCAAAAAATTTGATGCTGTT GGGAGTGAAAATAATCACAGCCTGAAAAGTAGCATCGCCTCTGGACGGAAACCCCTACATGACATAAACCAAGTAACAGACTCAACTGCATATCATTCTT CGTTGAATGGGTTTTCTTCAAAAGTAGATCCACTTAGAATGTTATCAGGAAGGTCATTGGCTGATATTTCCAATACCATTAACACTGTGCATACAAACAA TAGACAACAACCTGCTAGTGGAAAACGAAGACTAGGACCACATGCAATGGTTTCTCCCTTTAAAAAGCCTCGTGGCTGCAATTCTTCCATCCATTCTGAC AACAACGTTGGAGTTTTTTCTAATGGTTTGTGGTCTTCAGGTTTTTCTCAATTTTCTGGGGATGCTTCCGTAAGCAAAATAAAGGTTTCTACCTTGTATC CATTTCAGCACCCAAGGATGCACATGAAACATTTTTTTGCAGTGCCTTCATTAGATCAAAAAGTGCAATTTCCAAACCTGGTCAGACAGATGACATCAGG TAATGCAGAAAAATATGTGTTCCATGAGGGGTCTGGTGAAGGTGGTATCGGAGCAGAGGCTTTTGTCAATCTTTTGGTACAGCATGGTGCTTCCACACAT TTTGCTTCTAAAGAGTGGGTCTTGAATCATTACAAATGGATTGTTTGGAAGCTGGCATGCTATGTGAGATGCTGTTCAGCTAGGTCTGCTGGAAATTTTT TGACTATATCAAATGTACTTGAGGAACTGAAGTACAGATATGAAAGAGAAGTGAACCATGGTCACCGATCGACCCTAAAGAAAATTCTTGAAGGGGATGC ATTACCTTCTTCAATGATGGTTCTATGCATTTCTAGCATTCACTCTAATCATGGACTGGAAAATGGGACTTCTTCTGAGACAGAGACTGGGACTCAGAGC AGTGAGTCAGTAATAGTCGAACTAACTGATGGATGGTATTCTATGAATGCCATGTTAGATGTTCCGTTGTCAGAGCAACTAGCTTCTGGAAAATTGTTTG TAGGACAGAAGCTTCGGATCTGGGGAGCAGGATTATGTGGCTGGCATGGGCCAGTTTCACCCCTTGAGGTGTCATCAGCAGTTAGTTTAATGCTGCACAT AAATGGAACATATAGAGCTCATTGGGCAGACCGGTTAGGATTTTGTAAGGTAGCTGGTCCACCTTTGGCCTTCAGATGCATAAAAGGCAATGGTGGTCTA ATCCCTCAAACTTTGGCTGGAGTTACTCGCATATATCCTATTCTTTACAAGGAAAGGTTAAGCTGTGGAAGGTCTGTTGTCATATCAGAGAGAATGGAGG ATAAAATGACGGAGCTATATAATCAGAGATGCTCTGCTGTTGTAGAAGGCATCATTTCGGATTATCAGAAGGAAAGAAGAGGTTCACGTATTGATGAAAG TGACAGTGAAGGAGCTAAGATTTATAAAATGCTGGAAGCAGCTGAAGAACCTGAGTTCCTAATGGCAGATATGAGTCCAGAGCAGCTTAGTTCTTTTTCT GCATATAAGGCCAAATTAAATGCAATCAAACATTCTGAAATGGAAAAAACAATTGAGAAAGCTTTGAAAGATGCTGGCTTAAGAAACAGAGAAGTCACAC CATTTATGAGGTTGCGGGTTGTTGGATTAACTCACAAAACTCGACAAGACCGGCCGAAAGAGGGCATAGTAACAATTTGGAACCCAACAGAGAAGCAGCG GCAGGAGTTGGTAGAGGGAGAAGCATATGTAATCGCAGGTCTCATACCATCAGGTGTTGATTTAGACATCCTTCACTTGCAGACTAGAGGATCTTCCACC CAGTGGTTGCCTTTATCTTCTGATGCAAAAGAACAGTTTAAGCCTTTTTTCAGTAATCGAAAATCGTTCTCAATGTCAAGCTTGAGTGACATCCCTCTTT CCAGTGAGTTTGATATTGCTGCACATGTTGTGCATGTGGGAGAGGTTTATTTGTCAAGTCAGCAAAAAAAACAATGGGTTTTCGTGACTGATGGATCCAT TATGCATGGTTTACAATCAGAAACAATCTCTTTGCTTGCCATTTGCTTTTGCTCTCCATCAATTGATTATGATTCATTACCATTGATTAACTATAATCTT GCTGGATCTACGGTAATTACAATGTCTTGTATTTTCTTTTACTTATATTTTTGGCCTGTATATCCACTATGGATTATGATTTATTTCAATCAAGTAACTG TAAACTTGTTATGATTTTCGTTTATCCTTTATCAATAGCTTTTACTGCTCTGTCCTTCATACTTTCCGGACAAAATAAAAATGGCACCTTATAAGTCTGT GCATATATCAGTATATATTTCAGATTAGGTTTTAGGTAAATGCTATTGACACTCAATATTATCATGCATGCTCACTAGAAACCAATCACAAGTTTGTTTT TTTATTTACGAAGGTGAATATCGGTTAATGAGAAATATGAACAGACATTTGAGACTGCCAATAGTCGCACCCGTGGTTTCGTTTTTATTACTACAAGTCT ACAAATATATAGTCTGTGAAGTCTTTATGTTGTCTAGTGTGTGAAACATGATTAATGTTGCATTATGTTACAAGTTAGATTAGTCTTATATTTTCATTAT ATGTAGGTTGGTTTCTGTAATCTTATTAAAAGAGAAAAGGACAAAACAAACCATATCTGGGTTGCTGATGCTACCGAAAACTCGACCTATTGTTTGAGTT ACGATTCCCTGCACCATGCTCACCTCAGAAACACCGCCAGCTCCATCAGAAGATGGGCAAACAACTCTAGCTTGACAATAGAGAAACTCAAGGAAAAAGT GTTGTCTATGGTTGGTGATTGTAAAGGATAACTAAGATGGGCCTAAATTGCTATTTTGCCATTGGTCTTGATTTGCATATGGAAGGGTATTCACTTAACC CATGCTCTTACCATTAATGTCATATTAAGGTAATGGTTTTAAATCTCTTAATTTAATGAAGAGATATAGTTAGTTATACTTTCTTACATTAACTCAGTAT AGTCATAGCAAAATGTGATTGTACCCAATTATGATATTTTTTGCTTTGTAATATAATCACAATGGAATGAATTGATGAGTGATCTATGACAAAATTTGAA GGTTATATCTGAAAAATTAAAGCTTGTAGTGGATTGATTGAGCAAGCAAAATGCTAACCCACACATTCTTGGCCTAACATTATGACAGTTTTGTTGATTT GTCCTAACTTAACAAATAAAATAATACTATCTGTGTAAAGATTTATACATAGTTACTATATCATTTGTATTACTTTTATTTAAGAGTCAATAGTTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_27870; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_228139
| Blastp | Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B from Arabidopsis with 44.33% of identity |
|---|---|
| Blastx | Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B from Arabidopsis with 44.07% of identity |
| Eggnog | Breast cancer 2, early onset(ENOG410Y06W) |
| Kegg | Link to kegg annotations (AT5G01630) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438733.1) |
| Pfam | BRCA2 repeat (PF00634.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |