| Id Trinity | FTRINITY_DN52781_c4_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_229516 |
| Sequence | GTTCCACTTCAGGGGTTGCAGAGAGAAGAATGGCAGAAGGGGCACGTGGTAGCTTCGGTGGGAACCGGTGGCCAAGACAAGAGACTTTGGCGTTGTTAAG GATACGGTCGGATATGGACGTGGCGTTTCGTGATGCAAGTGTTAAAAGTCCCTTGTGGGAACAGGTTTCCAGGTTCAATTATTTATTCACTTCATTTCCT TTTCCTTTTACTTTTTTCACTTCAATGTCAATTTTGATCTATCACTTTTTTTAAAATATGAGCAAATTTGATTCTTACCATTTCTTTGTAGTTTTTATTC ATTAGTTTGCTTCTTCTCATTGATTTGATTTCACCTCAATGTAAATTTTGAGGTTCTATAAATGTTTCACTTCTTCCTTTGTTTCTTATCATTGATTTCA CTTCACTTTAGTTCAATGCAAAATTTGAGGTTCTACTAATATTTTTGCTTTTAATTCATGGGGTTTGAAGATCTAGAATTCAATTTTGCTTGAACTATTA TTCTTTGAAATATGTTCTACCAGCTTCAATTATATCTTCCCCCCTCACAATCATTTGGATTTGCTTCCTTTTGCGGTTCCTGTAGTATTCTTCTTCATTT CCTTGAAATCCTCCTTTTTTTTCTTCCTTTTTTGTTTTGAGTTTGAATGAATGAATATAAAACTATTAAAAAATAAACAATTTAGATGAGTGGAGATTCA TGATTTGGGTGTGATTTGCTTTTCCAATATCCACTTTGGTTCATGTCTTATTTTCCAAATAAGTTACCAACTTGAATTGAGTGTATGAAAAGCAAGATTT TCTTCTGCCTTTATTTCAGTTACCCACTCTTACGGGGAAACTCAGGTAGATTATCAAATCATCTAACTTGCGTTTCATGTATTTTTCATGGGAGACATTT CTGCTCATCAATTCTTTGGATTTCTTATTAATTAAAACAAAATTTCAATTATACCAACTTTATTATTTTCTCCTATCTCTCTCGGTAACTTTCATTTCCA TTAATTTTTTTCTGCTTCAATTAATTCACCCCACACACTTATTTTTATGTTTTACTATCTTCTTTTCCCAATGGTTTTTACCCTTTGTCTTTTAGCTGAA TTTGGTGGGATAAAATAAACCCAGATAGATACCTTTTTTTTCTTTCTTTTATATCATTTGTCTTTGTTTGGACACTTTGGTTTTCAGGAAGCTAGCAGAG CTTGGGTATCACAGAAACGCTAAGAAATGCAAAGAGAAATTTGAGAATGTATACAAGTATCACAAGAGAACCAAAGAAGGTCGAAGTGGCAAATCTGAAG GCAAAACATATCGATTTTTTGATCAATTAGAAGCTCTTGATCATCTTCATCAACCTCCAACAACTCCATCCCCTAACCCACCACAACCACCACTTGCACC ACCACCATTATCATCAATAGTACCAACAACTACAGTGGCAGTGCCAATGTCACAAGTGGTTAACAACACCACTCATAGTTGTGTCCCTCATGTTACTGTT CCATCAACAACTACTGGTGCTACAACAGTACAATCTTTGACCATGAATCAAGGCATTGTTGTCACTACTACCCCATCAATTAGCCTTCCAAATATACCTT CTTATCCACCTACAAACCCTACAATCTTCCCCACACCACCCCCATTACCACCACAAGCAACAACAATAAACCCTACAGCCAACAATGCCACCGTACCAAT CTCTTTCCCCAACATCCCAAACGATCTCTTGTCCAACTCTTCCTCATCGACTTCTTCGGATGATGGAATGTTGGAGGATAGGCATAAGCGGAAGCGGAAG CGCAAATGGGAGGACTTCTTCCATAGACTAATGAAGGGAGTAGTGAAGAAGCAAGAGGAACAACAAAGGACATTCTTGGAAGCTATAGAGAAACGCGAGC ACGAGCTAATGGCGAGAGAAGAAGCATGGAGAGTGCAAGAGATGCAAAGGATCAATAGGGAGAGGGAAATTTTAGCTCAAGAAAGATCAGTAGCTGCTGT CAAAGATGCTGCCGTTATGGCATTCTTGCAAAAGATAGCTGAACAACAAAATGGTGGACAAGCCTTGAACACCATCAACATTCCAACGCAACCACAGCCA CAACCGGTGGCACAACCAATTGCACCGCAAACACTAGTGCCAGATATTGTTCCAACACTGGTGCAACCGCAAGTACAATCACAACAACCACAGCTGCAAT TAGTTGTTCAGCCCGGCCCACCAATACAACCTGTAGTGGTGCCACCGGTCCCACCGCAACAACATCAACTAGTGACGACTATGGAACCAGTGAGAGCTGA TAATAATGGGGAGAACATGATGGGAGCAAGCTCATCAAGGTGGCCAAAAGTGGAGATTGAAGCATTGATAAAGCTGAGAACTGAGCTTGACGCGAAGTAT CAAGAGAATGTACCAAAAGGGCCACTTTGGGAAGAGATCTCATCCTCAATGAGGAAACTGGGGTACAATAGGAATGCCAAGAGGTGCAAAGAGAAATGGG AGAACATCAACAAGTACTTCAAGAAGGTGAAAGAAAGCAACAAGAATAGACCACAAGATTCCAAAACATGTCCATATTTTCACCAGCTTGATGCACTTTA TAGAGAGAAGAAGAAGATGGTGCAGCCAGAGAGCATAGTGGCGCCGCTGATGGTGCAACCGGAGCAGCAATGGCCTCCTCAGCAGCATAGGGAAGAAGAA GAGGAAGGCGATGATGATGATTTTGATGAAGAAGAGAAAGATAATGGAGAGGAAGAAGAAGATGAAGAGAATGGAAGTGGTGGTAAGTATGAGGTAGTGG CAAATAAGGGTCCTTCAGCAGCATCAGTGGGTGGTGCTTCAGGTGAATAGTACTGTAGTGAAAGGTGCAAAAAAGTGCCCAAAAGAATGACACGTGTGAG TGTGTGTGTCAAAGAGATTATTGCAGGGGTTGTCGTAAAAGTGGAGAGTGGTGGTCGGAGGCTATTGGTGGTGGTTGTGGAAATGTGGAAATGTGGAAGA ATTTGAAAATAGTGTACGACAGAATGACACATGGGTACTGCGGTGGTGGGGATTCAGTGGGGTTTGGTACTTTTGTTGTTTCATATAGTCAGATAGATTA TATGTTTTTCTAATTTATAAAATTTTATTATTTTTTGGATAATTAATAAGGTACAGATCCAGGTTCCAATATATGAATAATAAAGAAAAAGGAGAGAAAC ACACCATGTTTTTAATTTTTGTTTTTAATATTATGCTGGTGTAAATGAGAGAGGATATTGATTGGGGTTTTGTCTTTTATTTTTCAATTTTCTTCCTCTT GAAATATTCATTTATTTTTATTTTTAGTTTCCTTGTTTTAGCTTTATATATATATATAGATATAGATATGCACAAATGTTATGAATCTCTCTCTTTTCCT ATATAGTGTTATACAATTGGTTCCCCAAGATTCAGATGCAATACATTCAATAAAAAACAATATACTTCAAATCTCTACCTTCTCTTTCTCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_28065; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_229516
| Blastp | Trihelix transcription factor GT-2 from Arabidopsis with 41.77% of identity |
|---|---|
| Blastx | Trihelix transcription factor GT-2 from Arabidopsis with 66.17% of identity |
| Eggnog | chromatin binding(ENOG410YBXG) |
| Kegg | Link to kegg annotations (AT1G76890) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453353.1) |
| Pfam | Myb/SANT-like DNA-binding domain (PF13837.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |