| Id Trinity | FTRINITY_DN52798_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_229456 |
| Sequence | CAGGATTCAAAATTTCAATTCACAGGACTTAATAAGTGTGTCAATTAAGCTACAGATTCAAAATAATCAAGGTGAAGTTATGTAATTAAAATAATGTAAA GTAAGATGTGTAAATATGTATGGTTAGTATCATTCAAAAGAAAACATGAACAAAATGGGACACATTGAATATCAAATCAACCCCACCAATCCACCACTCT ATGTCTTCAATGCTGCAAGCAGTCTTATTTGGACAACCTTAGAAGCAAACCATCACATAAGGAGCACCTTGGTTTAATTTCTTCAGCTCAAAATGGATAA GAGCTGGAGTCTGAATTTTCTGCTCCTAATCCTCCATTTATGTACCACACAAGCTGCATTTGGTGTTGGTGGTGGTGTAGGTGTTGGTGTTGGCAATGGT GGAGTTTTTTGGGTTGGTGGAGAGATTAACAGCCCAGAGCCACCTAGATCTTCAGTGACAAAGCTGGATGAAGCTTATACAGCTCTTCAGGTTTGGAAAT CTGCAATCAGCAATGACCCTCTAAAGATTTTAGATAGTTGGGTTGGTCCTAATGTGTGTTCTTACAAAGGAGTCTTTTGTTCAAATCTTCAATCTGAAAT GGCTTCATCAAATGTACTTGTTGTTGCAGGCATAGATCTCAACCATGCAAATCTCCAAGGAACACTTGTCAAAGAGCTCTCTTTACTCACTGATATGTCT CTTCTCCACCTCAACAGTAACAGATTCAGTGGCACAGTTCCTGATACATTCAGAGACCTCACATCATTGGAAGAGTTAGACCTCAGCAACAACCAACTTT CAGGTACTTTTCCTTCTGTCACTTTATACATGCCAAGCCTCATCTACTTGGACATCAGATTCAACTCCTTCTCAGGTTCTCTCCCACAAGAACTTTTCAA TAAGAATCTTGATGCAATCTTTGTTAACAACAATCAATTTGAAGGTGAAATTCCTCAAAACTTGGGTAATTCTCCTGCCTCAGTGATAAATTTAGCCAAC AACAAGCTCAATGGAAACATTCCAGCAAGTTTTGGCTTCATGGGTTCCAAAGTAAAAGAGATCCTTTTCCTTAATAACCAGTTAACAGGTTGCATTCCTG AAGGAGTAGGGCTATTCACAGAGATGCAAGTTCTGGATGTGAGCTTCAATTCACTTATGGGTCATGTGCCAGACACACTATCTTGCCTGCAAAATATACA AGTCCTTAACTTGGCACATAACAAACTTTCTGGAGAGTTATCAGAAGTACTATGCTCTCTAAGAAGTCTTGCAAATCTAACAGTTGCATACAATTTCTTC TCTGGGTTCAGCCAGCAATGCTCAAAGCTTTTCTTTAGGAATATTGGTTTTGATTTTTCACTTAACTGCATTCCTGGAAGGGACATGCAAAGACCTCAAC CTGAATGCTCTGTGATACCAGGTGGTAGCCTAAGTTGTATCAGAATCCCAACACCAAAGCCTCTTGTTTGTGCTTCCTTGGTTGTAAGTACCACTAACAA CACTCATCACACTTCACCATCATCATCATCTCCTTGATGCTTACCATATACTTTTATTCATGGCTGTTCCATTAATTCATGCTACAAATCTTAATTCAGA CCCTGCTAATTTTAATTCTTCACAGATTCAGTAAACATATTGGTGAATAAACTTGCATAGTTTTTTAAGGAAAAATATTTAATATTTATATTGACCAGCA CATATCAACAAGCTCTGAAAATTTATGCTTCACGTGAGAAGCCTATTTGATTTAATTGCTTGAAGTGTTGTACTAAATTTTATACTACTAATTTTGTTAA ATCCCAAAATAACTTAAGCTTGTTTTTCCAACTGAGCTTCCTCATGAATAAATCAAATGAGTTTTCATAAAAAGCTCACAAAAGAACCTTTTTTTTTCGG AACCAAGTTAATGGAAGAAAAAAATGAACTTTAACAAGATTAGGAAAAAAAGTTGCACTTCGATGAGATTTTTCCATGTTCTTTAAAAAAAACAAAGTGT ATTTGATTTCACAAAAAATATGGAAGAGGAAAGATATTATTTTTATAAGGTTCCTCACGAAATTTGGCATAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_28185; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_229456
| Blastp | Leucine-rich repeat extensin-like protein 6 from Arabidopsis with 49.24% of identity |
|---|---|
| Blastx | Leucine-rich repeat extensin-like protein 6 from Arabidopsis with 49.24% of identity |
| Eggnog | leucine-rich repeat extensin-like protein(ENOG410Y973) |
| Kegg | Link to kegg annotations (AT3G22800) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436216.1) |
| Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |