Id Trinity | FTRINITY_DN52798_c0_g2_i5 |
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Name Transcript | Ll_transcript_229464 |
Sequence | GGAACTTTGGTGAACATTAGAAAAAAGGGTGTAAATTTAAGGTAAGCTGTATGGTGAGCAATTTAGTATGATTCAAAAGAAAAACATGAATAAAAAATGG CACATTGAAGACCAAATCAACCCCACCAGTTTACCACTCTCTCTCTTCAATGCAGCAAGCAACCTTATTTGGACAACCTTAGAAGCACACAATCAAATAA GGATCATGTTGGTGTCTTCAGCTAAAATGTATAAAAACTATATTATGAATTTTCTCCTCCTCCACTTCCTCCTCCATTTAAGTGAAACACAAGCTGCATT TGGTGTTAGTGGTGGTGTAGGTATAGGTGTTGGTGTTGGCAATGGTGGAGTGGTTTGGGTTGGTGGAAGGATTAACAGCCCAGAGCCACCTAGATCTTCA GTGCCAAAGCTGAATGGAGCTTACACTGCTCTTCAGACTTGGAAATCTGCAATTACTGATGACCCTCTAAAGATTTTAGATACTTGGGTTGGTCCTAATG TGTGTTCTTACAAAGGAGTCTTTTGTTCAAACCCTGAAGATGAAATGGCTTCATCAACTGTACTTGTTTCAGGCATAGATCTCAACCATGCAAATCTCCA AGGAACTCTTGTTAAAGAGCTCTCTTTGCTCATTGGTATGTCTCTTCTCCACCTCAACAGTAATAGGTTCACTGGAACTGTTCCTGAATCATTCAGAGAC CTCACATCATTGGAAGAGTTAGACCTAAGCAACAACCAACTTTCAGGTCCTTTTCCTTCTGTCACTTTATACATGCCAAGCCTCATCTACTTGGACATCA GATTCAACTCCTTCTCAGGTTCCCTCCCTCAAGAACTTTTCAATAAGAATCTTGATGCAATATTTGTCAACAACAATCAATTTGAAGGAGAAATACCTCA AAACTTGGGTAATTCTCCTGCCTCAGTGATAAATTTAGCCAACAACAAGCTCAGTGGAAATATTCCAGCAAGTTTTGGCTTCATGGGTTCCAAAGTAAAA GAGATTCTCTTCCTTAATAACCAGTTAACTGGTTGCATTCCTGAAGGAGTTGGGCTATTCACAGAGATGCAAGTTCTAGATGTGAGCTTCAATTCACTTA TAGGCCATGTTCCTGACACACTATCTTGCCTGCAAGATATAGAAGTCCTTAATTTGGCACATAACAAGCTTTCTGGTGAGTTATCAGATGTACTATGCTC TCTGAGAAGCCTTGCAAATCTAACAATTGCTTACAATTTCTTCTCTGGGTTCAGCCAGCAATGCTCAAAGCTTTTCTTTAGGAATATTGGTTTTGATTTT TCACTTAACTGCATTCCTGGAAGGGACATGCAAAGACCTCAACCTGAATGCTCTGTGATACCAGGTGGTAGCCTAAGTTGTATCAGAATCCCTGCACCAA ACCCTCTTGTTTGTGGTGCCTTGGCTGTAAGTAGTACCACTAAGAACACTGATCATAGTTCACCATCTCCTTGATGTTTACCTTATAGTTTTAGTTATAG GTTGGTCATGGCTATTCCATTAATTGGTGCTACCAATCTTAATTCAGACCCTGCTAATTTAATTCTTCATACATTCAGTATACATATTGGTACATATACT CCCTAGATTTAAAGGAAAAATATTTAATTTTGACATGCCTATTTGACTTGGTTGCTTTAATTTGAACTTGATTATCACAGGTTAACAAAAATTATCATTT TATTCTTTTTACACTTTATGTACAAAATCTTG BLAST |
Tissue | flowers |
Gene name | LI_gene_28185; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_229464
Blastp | Leucine-rich repeat extensin-like protein 4 from Arabidopsis with 48.8% of identity |
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Blastx | Leucine-rich repeat extensin-like protein 4 from Arabidopsis with 48.8% of identity |
Eggnog | leucine-rich repeat extensin-like protein(ENOG410Y973) |
Kegg | Link to kegg annotations (AT3G24480) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436216.1) |
Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |