| Id Trinity | FTRINITY_DN52805_c4_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_235212 |
| Sequence | CAAATATTTAACTAAAGCAAATAATACAGAAAAATCAAAAGAAAATAGTAGAGATATTTGAGCAGGAGTTAACAAAAAAATAAAAATAAAAAGTAGTTGA AGGGAGAGGTTATGGATAAGTGTTGAAACGAAGAGGCGGAGAGCATATTGAGTTGCAGATATTATTTTTTTGCGTGAGGGATAATTCCAACTGCAATGAT GGAATCATCAGTTTTTGTTTCTCACGTGGACACACTCCGGCTCCTAGCCGCCGCTATTCCCTCCGCCACTCACCGCTCATCTTGGACTGTTTCCCGGTGC TTACACCGCTCTGCCGCTCCTCTTCCCACCCTTCGTCTCTCCCCGCTTCTCGCTTCCAACACCCTCACCGCCAATTCCGCTCCAAAAAGTGGAGTGTACA CTGTTGGCGACTTTATGACAAAGAAACAGAGTTTGCATGTAGTAAAGCCTACAACATCTGTTGACGAAGCTCTGGAACTTCTTGTGGAACACAGGATAAC TGGTTTTCCTGTGATTGATGATAACTGGAAACTTGTGAGTTATTCTTACCTATTTTCATGATCCACTTTAAGTATGTTCATATATTTATGTCTCTACTTC ATTGATTACTAAAATTCTCTCACTTTTCCATTTTGTTTTCCGTTCAAGTTTTAACACACACTGTTTGAAGAATTAATTGCAATTTAATTTGCTCTGTCGT GGAGTTAAGTCTCGGTTCACCGTTTAGATTGTTGCCTTGTAACATGGTGTTCATGGATACTAGTTTTTGAAATAGCTGTCCTAACTGACCCTTATCTTCC AAGTGAGTGTTAGATCCTGTACTACTCCCCTATTCTTTCTCTGGTAGACCTTCCCGAACATCCTATGAGAGCCAGATGCCTTAATTAGTACTTGGTCTTT CGTTTCATTTGAAATCCATTCCCCTTAAATATTTCTGAAGGTTCTTTAATACTCTGCAGGTTGGTGTTGTTTCAGACTATGACTTGCTAGCTCTGGACTC CATATCTGGTAATAGGCAACAAGACAATAGCATGTTTCCAGAAGTGGACAGTAATTGGAAAGTATGTTTAACATTCTTTCTCTTTGATAGTTAATTCATC TTGTATCATGGACTTTAATGCACTCATTGGTAGGATAAGACTAGTCTATGGTTTTTATACTTAAGATTACTAAACAAGATGAGTTTACTGAAAATATATT TTGATAGTTGCCCAACCTCTTAGGGAGCTGGAGTAGTCTTGTTCAGAAATGCAAAATCTGTATGTCACTACTGCTAAATTTGAAATACAGCAGGGTATTC AAACATTCATACTAGATGGTTTCTTATACGATGTTTTGCAGTTTTCAACTCTTATAGTCACCGTCTCCTTTCGAAAGAAACACAAGAATCAACGTCTATT CCCATTAGGGGGTGACTTTAGCTATATATATCAAACCATGCAATTATCTTCTATCAAAGGCCAAACGTTCTTATTGTTCATTTAGTGCTAACTGCTAAGT CCTTTGTAATGGTTTCTCACGATTCTTGTATGGTAGTAATGAATATTTATAGGCTGTGGAACATGCCACAGAACAAAAGTAGACGTGCTGTGTGTATCTT GACATGTTTTGTGTCTTGCCTACTCCTTTTAATTTTAATGTGTAATATATGGGAATTTTTATCGTGCCTGAGTGAAGAAAAGGAAATTTTTTATAGGGAA ACTATGTATATTAGTTTAGATGTATTAAAACATAAATTTCGGATAAAAAACATTTTTTTTTCCTGAATAGGTTTTCTAAGTAGTTAGCATTCTCCTTGTT CTCATTAGGAAGGGTTAATTTCTAATGTTATTGAAAGCTGTGGGCATGAACGTCAGTTACAATAAAGCAAGATCAGCTTCTTAGAGGGAATGTTAATGAA ATATAGTTAAGCGAGCTAAGACAAAACCCTGTGTTTGAAAATGGTGTGTACAAACACAGTAAGAATTTAAAACTGTGATTTGCAGTGTTTTTATTTTTCT ATTCCTTAATCAATGCCATAAATACTAATAAGGCACAACGGAAGGGTGCTGCTAGGTTCATTAATGCCGTAAATACAGTAAGAACAAGTTATTCAGGAAG GGTGAGAGTCCTAGTTAATTAGAGTTTGAATAAAGTGAAGTTCACTAATATGATTGGAGTCCTGCAGACTTTCAATGAGATTCAGCAACTGCTGAGTAAG ACCAACGGAAAGTTGATCGGTGAAGTAATGACCACTTCCCCTATGGTTGTTCGAGAGACCACCAATCTCGAGGATGCTGCTAGGTTGTTGCTGGAAACAA AATTTCGACGCCTTCCAGTTGTAGATGCCGATAATAGGCTCGTAAGAGACTCCCCCATTCTATTATCTCTGGTTTCTTTATCCTAGCATTTTTAAGGGGT TATTAGCCGATCCCACTTAGTAGGATCAAGGTTTGGTTGTGTTGCTGTTTCTAAGGGGTGATTATTACTGATCTGCAGGTTGGGATTCTCACAAGAGGAA ATGTGGTGAGAGCCGCACTTCAAATTAAACAAGCTACCCAAACGACATAGGATTTAGAAAACCATTAAAAATGGTGCTGGGTTTCGTGCTGTAGTTAATT TAAGTGTTACCAGAAGCTAGCTTCAATTGGAATTAAAATTTTAGCTTAGACATGTGAATCTTATAATATTGTTTTACTGTTACACGAATGCTTGTCACTG TCAATATTTCTAATAGGCAATTTGTATCGTGAAAGATCAAAATGTCAAATGGGTTGAAAGATTTGTGATTAACCAATTTAATATCTCGGATTATGTTTAT AAATTAAGCCCCTTAAATAGTCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_28275; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_235212
| Blastp | CBS domain-containing protein CBSX1, chloroplastic from Arabidopsis with 74.6% of identity |
|---|---|
| Blastx | CBS domain-containing protein CBSX1, chloroplastic from Arabidopsis with 75.81% of identity |
| Eggnog | (CBS) domain(ENOG4111TWY) |
| Kegg | Link to kegg annotations (AT4G36910) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420202.1) |
| Pfam | CBS domain (PF00571.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |