Ll_transcript_235039

• Id Trinity: FTRINITY_DN52807_c2_g4_i1
• Name Transcript: Ll_transcript_235039
• Sequence: ATTTGATGAGAAGAAAGAAAGGTAGTGTAATATGAATTAGAGGATGGTTCCATAGATTTTGTTATTAGCTTATTTGTTGCCTATTAATTAATAGGTATAG AAATAGAAGTAGGAAAGGCGTTGTTACTCTATGAGGTTGACATGATGAATATGATGTATGCTTCCGTCCTTCTTCCCTCATCATCCTCCTATCTTATCCC ATTCACTAAAACCACTTTTACTTGTAATCTTTCAAAATCTGTTTGGACAAGAACACCATCATCATACAATAAACAACAACAACAACAACAACAACAACAT AGACCTAGTAGAACACAACAACCTTCACACTTGGATCATGAGGTTGACATGGATGACCTTTTATCTTCAATAAGCGAAACCCAAAATGAACAACAACTCT TCGCTCTTCTCTCTCGTTACAGTGGAAGACAACTCTCTATTCGATTCATGGTTTCACTCCTCTCTCGTCAATCTGATTGGCAGCGTTCCCTCGCCATTCT TGATTGGATCAATCACAAGGCTCGTTACTCTCCTTCTCTCTTCGCTTTCAACGTTGTTATCAGGAATGTCCTCAGAGCCAACCAATGGCAACTCGCACAC GGCCTGTTTGATGAAATGCGCCAAATGGGTCTTTCCCCTGATAGGTACACTTACTCCACCCTCATCACTTACTTTGGCAAACACGGCTTGTTTGATTCTT CTCTCTTTTGGCTCCAGCAGATGGAGCAAGACAATGTGCCCGGTGACCTTGTCTTGTATTCTAATTTGATCGAGCTTTCGCGAAAGTTGTGTGACTATTC TAAGGCCATTTCCATCTTCACGAGATTGAAAAGCTCTGGTATTACTCCTGACCTTGTAGCATATAACTCCATGATTAATGTATTTGGGAAAGCTAAGCTC TTCCGCGAGGCACGCCTTCTACTTCACGAGATGAGGGAAAACGGTGTTCAACCAGACACGGTCAGCTACTCCACGCTTCTCACCATGTACGTTGAGAATC ATAAGTTTGTGGAAGCGCTTTCTGTGTTCTCTGAAATGAATGAAGGGAAGTGCGCACCTGATCTTACCACTTGTAATATCATGATTGATGTTTACGGCCA GCTTGACATGGCCAAGGAAGCCGACCGACTGTTCTGGAGCATGAGGAAAATCGGGATTGAACCAAGCGTGGTTAGTTATAATACGCTCTTGAGGGTTTAT GGAGAGGCTGAGCTATTTGGAGAAGCCATCCAACTGTTTCGTTTGATGCAAAAAAAGTGTATACAACAGAATGTGGTCACCTACAACACTATGATTAAGA TTTATGGCAAGTCCCTTGAGCATGAAAAGGCAACAAATCTTATTCAAGAAATGCAGAATAGAGGTATTGAACCGAATTCCATTACATATTCAACAATAAT ATCGATATGGGAGAAGGCAGGGAAACTAGATAGGGCAGCCATGTTGTTTCAAAAGTTAAGGAGTTCAGGAGCTGAAATCGATCAGGTTCTTTACCAGACG ATGATTGTAGCATATGAAAGGGCAGGTTTAGTTGGCCATGCTAAGCGTCTACTTCAAGAGCTAAAGCAACCGGATAGCATTCCTAGGGAGACTGCCATCA CGATTCTTGCTAGAGCCGGCAGAATTGAAGAGGCTACATGGATTTTCCGACAGGCTTTTGATGCCGGAGAGATTAAAGATATATCTGTGTTTAGCTGCAT GATTGATCTTTTCTCGAAGAACAAAAAGTATGCAAATGTTGTGGAAGTGTTTGAGAAGATGAGAGAGGTGGGATATTTTCCGGATTCTAATGTTATTGCT CTCGTGTTGAATGCTTTCGGAAAGCTGCGGGAATTTGAGAAAGCAGATGCTTTATACGGACAGATGTATGAAGAAGGGTGTGTTTTTCCAGATGAAGTTC ATTTCCAGATGCTAAGTCTTTATGGTGCAAAAAAGGATTTCAAGATGGTAGAGTCATTGTTTGAGAAGTTAGATTCCAATCCCAATATTAACAAGAAGGA GTTGCATCTTGTTGTTGCCAGCATATATGAAAGGGTAGATAGACTTAATGATTCTTCCCGGATCATGAACAGGATGAATCAAAGAGGGAATGGAAATCAT GACCGCGCTTAGAAGTATGCATCTGATTTTCCTTTGTTGACTTTGTATTGTTGATTAACATTCTTTGCACATGATCATCCACAAATGCTACATTAAGAAA ACTTCTGATATTCCTAACTTGGTGTCCTATCTCCTATGTATATATAATATATTGGGCAACAACACATTTCTGCCTAGCATCATCATTGGCTTAAATCCAG CGTTTATGAGCACTATTCTTTATAGTCATGTCCTTCTGAGAAGTAAAAAATGAACCCCCTGATGCTTTTTCGTTTCAGAAAGTTGAGACACTCTCATTAT ATTGGTTGTGTCTGTTTTAACACAAATTTTCACTTTATTGCTCATTATTGTTTCTACGGCAAAAGTCCATTGATCAATGATCATAAAGTAGGGAAGAAAA CAATATCATTACTCTTTTCTCTTGTAAAATCAATATTGATGTCAGATTAGTGTCTTAGTTCAAAGTTGCTATTTTATTTAGAGAAAAAATATGTGTGCAC
• Tissue: flowers
• Gene name: LI_gene_28297;
• Additional information: details;

Expression of Ll_transcript_235039

FPKM

• FPAB: 1.4
• FPNAB: 3.3
• LF1: 4.5
• LF2: 4.2
• LF3: 3.5
• LF4: 4.1
• UF1: 4.2
• UF2: 4.1
• UF3: 3.9
• UF4: 3.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_235039

• Blastp: Pentatricopeptide repeat-containing protein At5g39980, chloroplastic from Arabidopsis with 76.74% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g39980, chloroplastic from Arabidopsis with 76.74% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G39980)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438264.1)
• Pfam: PPR repeat family (PF13041.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;