Id Trinity | FTRINITY_DN52818_c0_g1_i2 |
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Name Transcript | Ll_transcript_234000 |
Sequence | CTTCGATCCCGATATTTATCTCTTGTCATTTTGCACATGCTTACTACTCACATCTTGACTATTTTTCTCCATCCTTCCCATCACTGACTTAATCTTCGGA ACACCTTTTCAAATGTTTTCATTGACAGGTCCAACCTCAACTCAGACAACTCCATGAAGAGTTCGAGCCAGATTACAACCCAACCCATGCTTTGCTCAGC CGACGAAAAGACCTCGATCCCAATTATTGCTCGGCTCACCCTCCTACGCACCAATAAGAACGAATCAATAATTAAAAAAAAATAAAGAATGTTAAGATTT TTTTAACTGACATGATATATTTTTATCGATATATCAAAAGTTTTCCATGTATATGCCAAATTTTCCTCTTATTCTTCCATTACGGTTCCTTTAATCATTA TTCATTTCCTCATCTAAACTTTCAGATTTGTTTTCCTTCCTCAATCGTTTTTGTGATTCCAATCAATAACAGTAATCTAAACAAAGCATATTGAAAATCG AAGGATACAAAATCAATTCACTATTCCAAATTTCTGAATCAAAGTTTCCACCATGCGAGGTCACGATTGGATCAACACAAATCTCCCTGAAGAGTTAATC GTCGAGATCTTCCGCCGCCTAGATTCCAAATCCACTCGCGACGCTTGTTCCCTCGTCTGCCACCGCTGGCTCCGCCTTGACCGACTCACTAGATCCTCCC TCAAAATCGGCGCCACCGGTTCCCCTGACCTTTTCCTCCGAATCCTATCCACTCGCTTTCCCAATGTCACCAATGTCCATATCGATCAGCGCCTCTCCGT TTCTCCACCTCCTCCTATTCAGGGGAGAAGAGGGTCAAGGGACAATTCTAAGGTTTCGTCTGAGGAGAGCGGTGGCAGCAGCAATGTTGTTTCTCTGTGT TTATCTGATGCTGGATTGGCTGCTATAGGGGAAGGGTTTCCCAAGCTTGAGAAGTTGAACTTGATTTGGTGTTCTGATGTTACTAGTGATGGATTAGATT CACTTGCTCGCAAATGCACTTTTTTGAAGTCCTTGGACTTGCAGGGTTGTTATGTCGGAGATCAAGGTCTAGCAGCTGTTGGACAGTGTTGCAAACAACT TGAAGATTTGAATCTGCGTTTTTGTGAAGGCTTGACCGATACTGGTTTGATTGAATTAGCCATAGGTGTGGGAAAATCTTTAAAATCTCTTGGTGTGGCA GCTTGTGCCAAAATAACTGACTCCTCAATGGAAGCTGTAGGATCACACTGTAGATCCCTTGAGAACTTGTCATTGGACTCTGAGTTCATCCACAATCAAG GGATCCTTGCTGTTGCTAGAGGATGTCCACATTTGAAAGTTATAAAGCTGCAGTGTATTAATGTTAATGATGATGCTTTGAAGGCTGTAGGTGCCAATTG TTTGTCTCTGGTGTCATTAGCTCTATATAGTTTTCAGAGGTTTACCGACATGGGTTTGTTTGCAATCGGGAAGGGATCTAAGAATTTGAAGAATTTGACT TTAAGTGATTGCTATTTCCTAAGTGACAAGGGTTTGGAAGCAATTGCAACCGGCTGCAAAGAACTTACTCATCTTGAAGTTAATGGATGCCACAATATTG GAACTTTGGGACTAAAGTCTGTTGGAAAGTCTTGCCAGCATCTCACTGAGTTGGCATTGCTTTACTGCCAAAGGATTGATGATCTTGGGCTTCTTCA BLAST |
Tissue | flowers |
Gene name | LI_gene_28347; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_234000
Blastp | F-box/LRR-repeat protein 4 from Arabidopsis with 63.08% of identity |
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Blastx | F-box/LRR-repeat protein 4 from Arabidopsis with 63.08% of identity |
Eggnog | F-box and leucine-rich repeat protein(ENOG410XQ54) |
Kegg | Link to kegg annotations (AT4G15475) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425930.1) |
Pfam | F-box-like (PF12937.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |