| Id Trinity | FTRINITY_DN52826_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_233950 |
| Sequence | AACGAAACAATTTCATAAGCTGCTTCCGTATTTTCCCGCTATTATTATTGCAGAAGAGTGAGAGAAATGGGTTCGAAAACCCTAATGGATTTTTGGCAAC CATCTTCGAAGCGATTGAAACAAACCCTCACTCCATCAATCTCCAAATCCGATGATCCCACCACCACTTCACTCTCCCTTCACCAAAAAGCACGCATCCA ACACAACAAGCTTCTCGCCAAGTCCAAGCGCAATCTCAATCTCTGTCTCCAAAAGGTCTCCGATTCTAAATCCAAAGGGGAGTTTTTAGCACTAGAGGAG TTGTTGGTAGAAGACACGTGGTTGGAAGCTCTCAACGGTGAACTTGAAAAACCCTATGCCATTACTCTTTCCAAATTTGTGGAAACTGAGATTAGTAGCG GCAATTATGTGTACCCTCCTTCTCATTTGATTTTCAATGCTCTTAATTCCACTCCTTTTCATACAGTTAAGGCTGTCATTCTTGGTCAGGACCCTTATCA TGGACCTGGTCAAGCGATGGGTCTCTCATTCTCAGTGCCTGAGGGTGTCAAAGTTCCTTCCAGTTTGGTAAATATATTTAAGGAACTTAAGGAAGACCTT GGCTGTTCGATTCCTCCCCATGGAAACCTAGAAAAATGGGCTGTGCAGGGAGTTCTCTTGCTCAATGCTGTTCTCACAGTCAGGAAGCATCAAGCAAACT CTCATGCAAAAAAGGGCTGGGAACAATTTACTGATTTTGTTATAAAGACAATCTCACAGAAGAAGGAAGGAGTTGTGTTTCTGTTGTGGGGAAACTCCGC TCGACAGAAATCGAGGTTGATCGATGCAACAAAGCATCACATTCTTGAAGCTGCGCATCCTTCTGGTTTATCTGCAAATAGAGGCTTCTTTGGCTGCAGA CTTTGAGGTTAATCCTCGATGCAACGGTAAGGTTGTTTGCCTTGTGACAGAGATCGTATCAGCACAATTGCAAGGTTGTTTGGCTTGTGACCTAGAGGTT GTGCCACATCTTGGAAACAACCTCTTCACATGTATTTGAAGGCTACCATCTTCAGACCACAATAAGTTGGCGCATCATGCACTGTACCGTGTTAATGTAG ACTATTGTGTTGAAATTCATTTTCCAAACACATTTTTTTCATTTTAAATCGATTTAGGATTTAAATTCTGTCCATGTCACATGGGCCTTTACGGTCTACT CCACCATCACTAATTAATGTGCAAGTGGGGAACATGATGCAGCCTTTTCATGTTCTGTTCCAATGATACTCGGATCTTATATAATAATATCATACTTAAA GGGCCTTAGATCAATATTCCTTTAACATGTCTAAGAAATTTTGGACCCTTTCTTCCTATCTTTATTTACTTATTTATTTATTGGAAAATGATATATCCTC TCACTATATTTTCTTACCATAAAAATATCACATATGTCACAATAAGATACTTTATTTATTAGTGATTGGTTTACAAGTAACACGTGTCATTTTTCTGTGG GTAGAAGGATTAGTAGGAGAATTTAGTAGGAGGATATAGCAGTGCTCTTATTTATTTATTTATTATTTGAGCAGGCACTTTTCTCGCACAAACCAACTTC TGGAGCAAAATGGGATCGGTCCCATTGATTGGCAACTATAATTGATATTTTAGAATTTCAAACCTTTATTCCTTATATCAGAATCTTTTTTGAAGCATGC TACTGCAAGCTTTGGGGTGGTGTTTATATGAGCCCCTTTCCTCTTAATTTAATGATAATTATGTTGATTATAAAGTCTCCTAAGAAAAAAGATGCTGTTG TCAATAGTTTGGCCCTGCATGTGTAGTCACTTATGAGGATTGTGCAGTACTGAGCAATGATCAATACTATACATTTTGTTCCACCTTTTTGTTATAGGAT ACTATATGGATTTCGTGCATCAACGATGTGCTGTCTTAATATTAGTATCCCATATTTTTATTGAAGAGAATCTTACAAGCACGAGATTACTTGCTTGCAT GTGAATTTTCAGATCAAAGCATCTAAATGTGGGGTATGAGCACTTTTTATTTATTCCAAAAGATAATGATTGTGTATGTGGAGTTTGTGATGGAGATGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_28407; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_233950
| Blastp | Uracil-DNA glycosylase, mitochondrial from Arabidopsis with 62.75% of identity |
|---|---|
| Blastx | Uracil-DNA glycosylase, mitochondrial from Arabidopsis with 62.75% of identity |
| Eggnog | Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (By similarity)(COG0692) |
| Kegg | Link to kegg annotations (AT3G18630) |
| CantataDB | Link to cantataDB annotations (CNT0000175) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450955.1) |
| Pfam | Uracil DNA glycosylase superfamily (PF03167.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |